RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 RAB9AP51151 201 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PLP1P60201 277 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 UBE2MP61081 183 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ACTR3P61158 418 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 YWHAGP61981 247 aaKnown RBP eCLIP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PRR3P79522 188 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 HMGN5P82970 282 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 BEX3Q00994 111 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 IRF8Q02556 426 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 BTN1A1Q13410 526 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CUL2Q13617 745 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SLC9A3R2Q15599 337 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CHRNA6Q15825 494 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF141Q15928 474 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 EXOC3L2Q2M3D2 409 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 RNASEKQ6P5S7 137 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 H2BFWTQ7Z2G1 175 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 DAZ4Q86SG3 579 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 NBPF5PQ86XG9 351 aaPredicted RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 LRRC75A-AS1Q8N1F1 130 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 MS4A15Q8N5U1 240 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CSGALNACT2Q8N6G5 542 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR2Z1Q8NG97 314 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR1S2Q8NGQ3 325 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR13C2Q8NGS9 318 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR2A1Q8NGT9 310 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PLPPR1Q8TBJ4 325 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 IGF2BP2-AS1Q96M15 143 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SLC29A1Q99808 456 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 MARVELD1Q9BSK0 173 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 LRRC40Q9H9A6 602 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 RETNQ9HD89 108 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 FGF20Q9NP95 211 aaPredicted RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 DAZ1Q9NQZ3 744 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF302Q9NR11 478 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 TUBG2Q9NRH3 451 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 AGPAT4Q9NRZ5 378 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 A0A1W2PPE3 182 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 XKRY2A2RUG3 117 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 H7C417 338 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 AP3B1O00203 1094 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CDC7O00311 574 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 RAB29O14966 203 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SETD1AO15047 1707 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 NVLO15381 856 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PSTPIP1O43586 416 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CDC40O60508 579 aaKnown RBP eCLIP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 NSD2O96028 1365 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SERPIND1P05546 499 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 EIF4EP06730 217 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CRYGBP07316 175 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF43P17038 809 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 KITLGP21583 273 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SLC1A2P43004 574 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SERPINB8P50452 374 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF83P51522 516 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SLC25A11Q02978 314 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 GBE1Q04446 702 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SELENBP1Q13228 472 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CACNA1SQ13698 1873 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF266Q14584 549 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PDK3Q15120 406 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 C6orf226Q5I0X4 101 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CTSL3PQ5NE16 218 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PPM1LQ5SGD2 360 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 C1orf185Q5T7R7 199 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PRAMEF5Q5TYX0 476 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 RPRD2Q5VT52 1461 aaKnown RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PRAMEF6Q5VXH4 476 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OFCC1Q8IZS5 231 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 UBE2J2Q8N2K1 259 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 GPR26Q8NDV2 337 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CCDC148Q8NFR7 591 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR4F6Q8NGB9 312 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR10AD1Q8NGE0 317 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR9K2Q8NGE7 335 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR1J4Q8NGS1 313 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 KCNG3Q8TAE7 436 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 MUC7Q8TAX7 377 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF502Q8TBZ5 544 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ACTL9Q8TC94 416 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 SLC7A13Q8TCU3 470 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 LRRC29Q8WV35 223 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 KIAA1143Q96AT1 154 aaPredicted RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ZNF707Q96C28 371 aaPredicted RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ECHDC3Q96DC8 303 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PRRC1Q96M27 445 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 CENPKQ9BS16 269 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 NUP58Q9BVL2 599 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 KIAA1671Q9BY89 1806 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 OR51M1Q9H341 326 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 ACP6Q9NPH0 428 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PDP1Q9P0J1 537 aaPredicted RBP0.37□□□□□ -2.35
PTPN22-203ENST00000460620 PITPNC1Q9UKF7 332 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 NPTNQ9Y639 398 aa0.37□□□□□ -2.35
PTPN22-203ENST00000460620 VWA8A3KMH1 1905 aa0.36□□□□□ -2.35
PTPN22-203ENST00000460620 INSRP06213 1382 aa0.36□□□□□ -2.35
PTPN22-203ENST00000460620 NINLQ9Y2I6 1382 aa0.36□□□□□ -2.35
PTPN22-203ENST00000460620 MROH7Q68CQ1 1323 aa0.36□□□□□ -2.35
PTPN22-203ENST00000460620 TTC41PQ6P2S7 1318 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms