RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SYT7O43581 403 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 TSPAN2O60636 221 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF14P17017 642 aaPredicted RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF20P17024 532 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 SLC25A1P53007 311 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 RPS15P62841 145 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 RBM39Q14498 530 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 C2orf76Q3KRA6 126 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 LRRC37A5PQ49AS3 106 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 TRIM61Q5EBN2 209 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 EXOSC6Q5RKV6 272 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF626Q68DY1 528 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 CPEB2Q7Z5Q1 589 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ANKRD37Q7Z713 158 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 CD163Q86VB7 1156 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 ARHGEF39Q8N4T4 335 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 OR13C9Q8NGT0 318 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 RGP1Q92546 391 aaPredicted RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 CHRDQ9H2X0 955 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 CFAP54Q96N23 3096 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 IGHV3-15A0A0B4J1V0 119 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 MEX3AA1L020 520 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 PNPP00491 289 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 CELA2AP08217 269 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 H2BFSP57053 126 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 SEZ6L2Q6UXD5 910 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 DND1Q8IYX4 353 aaKnown RBP13.78□□□□□ -0.2
LMNB1-203ENST00000460265 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 TLNRD1Q9H1K6 362 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
LMNB1-203ENST00000460265 OR4C45A6NMZ5 311 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 PHYHO14832 338 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 BGLAPP02818 100 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 CLPSP04118 112 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 BDKRB2P30411 391 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 RPS4XP62701 263 aaKnown RBP13.77□□□□□ -0.2
LMNB1-203ENST00000460265 PLA2G7Q13093 441 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 EMC4Q5J8M3 183 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 RHBDD2Q6NTF9 364 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 ZNF574Q6ZN55 896 aaPredicted RBP13.77□□□□□ -0.2
LMNB1-203ENST00000460265 TCTEX1D2Q8WW35 142 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 RBM24Q9BX46 236 aaKnown RBP13.77□□□□□ -0.2
LMNB1-203ENST00000460265 VSX1Q9NZR4 365 aaPredicted RBP13.77□□□□□ -0.2
LMNB1-203ENST00000460265 LRP12Q9Y561 859 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 PCDHGA5Q9Y5G8 931 aa13.77□□□□□ -0.2
LMNB1-203ENST00000460265 A0A1W2PQM1 296 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 NAP1L6A6NFF2 107 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 PLPP3O14495 311 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 UPK3AO75631 287 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 HCKP08631 526 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 LRRC18Q8N456 261 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 TMEM41AQ96HV5 264 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 C4orf45Q96LM5 186 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 GNRHR2Q96P88 292 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 OR8B4Q96RC9 309 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 M0QYG6 137 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ZNF432O94892 652 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 CCL4P13236 92 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 MGMTP16455 207 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ADRA2CP18825 462 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 DAP3P51398 398 aaKnown RBP13.77□□□□□ -0.21
LMNB1-203ENST00000460265 EFNB2P52799 333 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 C2orf68Q2NKX9 166 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 OR2W3Q7Z3T1 314 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ABHD12BQ7Z5M8 362 aaPredicted RBP13.77□□□□□ -0.21
LMNB1-203ENST00000460265 CDC20BQ86Y33 519 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ARMC10Q8N2F6 343 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 IFI44Q8TCB0 444 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 ZNF75AQ96N20 296 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 STEAP1Q9UHE8 339 aa13.77□□□□□ -0.21
LMNB1-203ENST00000460265 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 FBP1P09467 338 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 RAB40ALP0C0E4 278 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 GPX4P36969 197 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-203ENST00000460265 RAB2AP61019 212 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 MFGE8Q08431 387 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-203ENST00000460265 OR51A2Q8NGJ7 313 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 OR5D18Q8NGL1 313 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 RAB40AQ8WXH6 277 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 CNTNAP3BQ96NU0 1288 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 NMNAT2Q9BZQ4 307 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 OR52A1Q9UKL2 312 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 IGKV3D-11A0A0A0MRZ8 115 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 ZNF729A6NN14 1252 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-203ENST00000460265 GABARAPH6UMI1 98 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 TP53I11O14683 189 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 AMY2AP04746 511 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 CHAF1BQ13112 559 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 DCAF12L2Q5VW00 463 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 CDX2Q99626 313 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-203ENST00000460265 LOC107986453A0A1B0GWG9 222 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 PYCARD-AS1I3L0S3 204 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 GAAP10253 952 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 HTR2CP28335 458 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 MYBPHQ13203 477 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 UQCC3Q6UW78 93 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 BAIAP2L2Q6UXY1 529 aa13.76□□□□□ -0.21
LMNB1-203ENST00000460265 MOB3CQ70IA8 216 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms