RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 A0A1W2PPK0 400 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 PLSCR5A0PG75 271 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR5H1A6NKK0 313 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR4C45A6NMZ5 311 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DHRS7CA6NNS2 312 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 CLDN25C9JDP6 229 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 E9PI62 339 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DHRS3O75911 302 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SCGNO76038 276 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 TTRP02766 147 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 CSTBP04080 98 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ITGA5P08648 1049 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ACSM4P0C7M7 580 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 BDKRB2P30411 391 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 RPS19P39019 145 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 CA7P43166 264 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ASCL1P50553 236 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 IDH3GP51553 393 aaPredicted RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 TDGF1P3P51864 188 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ATP1B3P54709 279 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SCAND1P57086 179 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DEFA1P59665 94 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DEFA3P59666 94 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 HIST1H3AP68431 136 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 MRPS15P82914 257 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SPCS2Q15005 226 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 GABRA6Q16445 453 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF718Q3SXZ3 478 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 HIKESHIQ53FT3 197 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 CCDC92Q53HC0 331 aaPredicted RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 HIST2H3PS2Q5TEC6 136 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 OTPQ5XKR4 325 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 MYO7BQ6PIF6 2116 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 XKRXQ6PP77 449 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 PLXDC2Q6UX71 529 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 BAIAP2L2Q6UXY1 529 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 STAC2Q6ZMT1 411 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 HIST2H3AQ71DI3 136 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 CDH26Q8IXH8 852 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 RFLNBQ8N5W9 214 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 Q8NA96 180 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF485Q8NCK3 441 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR8S1Q8NH09 359 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DYNC2LI1Q8TCX1 351 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 RPL3LQ92901 407 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF837Q96EG3 531 aaPredicted RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 BORCS8Q96FH0 119 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 RADILQ96JH8 1075 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLC22A4Q9H015 551 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 OR10A4Q9H209 315 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZCCHC4Q9H5U6 513 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ESRP2Q9H6T0 727 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ELL3Q9HB65 397 aaPredicted RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 GPR84Q9NQS5 396 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLC17A5Q9NRA2 495 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF275Q9NSD4 429 aaPredicted RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 TBCCD1Q9NVR7 557 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 FAM206AQ9NX38 181 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 COMMD3Q9UBI1 195 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 DAPK2Q9UIK4 370 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 KLHDC2Q9Y2U9 406 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 MEMO1Q9Y316 297 aa5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 SF3B6Q9Y3B4 125 aaKnown RBP5.1□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF292O60281 2723 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF816-ZNF321PA0A0X1KG74 233 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 LOC390937A0A1W2PQ73 354 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FABP12A6NFH5 140 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CENPXA8MT69 81 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 A8MXE2 369 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 H3BSH0 61 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 M0R1B8 84 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ATXN7O15265 892 aaPredicted RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SULT1B1O43704 296 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 TNFSF13O75888 250 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 KDM4BO94953 1096 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PNPP00491 289 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 LALBAP00709 142 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 NRASP01111 189 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PATE4P0C8F1 98 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 UBBP0CG47 229 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CALCBP10092 127 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 SLC2A1P11166 492 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 BMP4P12644 408 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PSMB1P20618 241 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PTAFRP25105 342 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 HTR2CP28335 458 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 PCSK6P29122 969 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 NTF4P34130 210 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 THBS4P35443 961 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ZNF93P35789 620 aaPredicted RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 MNDAP41218 407 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 BMXP51813 675 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ART1P52961 327 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 MFGE8Q08431 387 aaPredicted RBP5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 FOXF2Q12947 444 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 ARL6IP1Q15041 203 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 RAB11BQ15907 218 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 C3orf36Q3SXR2 165 aa5.09□□□□□ -1.59
RNU1-88P-201ENST00000459274 CEP78Q5JTW2 689 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms