RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 VSX1Q9NZR4 365 aaPredicted RBP11.84□□□□□ -0.51
UPF3AP2-201ENST00000457924 CAB39Q9Y376 341 aaPredicted RBP11.84□□□□□ -0.51
UPF3AP2-201ENST00000457924 NOP16Q9Y3C1 178 aaKnown RBP11.84□□□□□ -0.51
UPF3AP2-201ENST00000457924 LHFPL6Q9Y693 200 aa11.84□□□□□ -0.51
UPF3AP2-201ENST00000457924 A0A087WUU8 490 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 TRAV38-1A0A0B4J264 116 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 ZNF816-ZNF321PA0A0X1KG74 233 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 G3V4G9 280 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 J3KTA2 159 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 PIN1P1O15428 100 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 TSPAN9O75954 239 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 NDUFB2O95178 105 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 ECDO95905 644 aaPredicted RBP11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 IGHA1P01876 353 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 IFNW1P05000 195 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 HOXA4Q00056 320 aaPredicted RBP11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 CORO6Q6QEF8 472 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 TBPL2Q6SJ96 375 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 PGAP1Q75T13 922 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 BTN2A1Q7KYR7 527 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 ADCK1Q86TW2 530 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 SLCO4A1Q96BD0 722 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 SLC22A4Q9H015 551 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 SMURF1Q9HCE7 757 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 VPREB3Q9UKI3 123 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 SNX13Q9Y5W8 968 aa11.83□□□□□ -0.52
UPF3AP2-201ENST00000457924 OOEPA6NGQ2 149 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 FAM220BPB1ANY3 271 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 F5H5K5 113 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 FXYD1O00168 92 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 SOCS2O14508 198 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 IMPA2O14732 288 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 FFAR1O14842 300 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 OR10H3O60404 316 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 NPPAP01160 153 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 LCATP04180 440 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 FBP1P09467 338 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 CA6P23280 308 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 CRABP1P29762 137 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 TGFBR2P37173 567 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 EGR3Q06889 387 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 COX10Q12887 443 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 MEP1BQ16820 701 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 RSPO1Q2MKA7 263 aaPredicted RBP11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 CDONQ4KMG0 1287 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 AGBL2Q5U5Z8 902 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 DNM1P34Q6PK57 102 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 MRPL21Q7Z2W9 205 aaKnown RBP11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 REC114Q7Z4M0 266 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 VMO1Q7Z5L0 202 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 GALNT4Q8N4A0 578 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 OR2T12Q8NG77 320 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 CNTD2Q9H8S5 307 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 NRIP3Q9NQ35 241 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 TMEM5Q9Y2B1 443 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 KPTNQ9Y664 436 aa11.82□□□□□ -0.52
UPF3AP2-201ENST00000457924 PLXNB1O43157 2135 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 A0A1B0GVI7 797 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 TMEM238LA0A1B0GVL6 79 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ANKRD61A6NGH8 418 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 DVL1O14640 695 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 GMDSO60547 372 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 GYPAP02724 150 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ECH1Q13011 328 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 COQ5Q5HYK3 327 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 KPRPQ5T749 579 aaPredicted RBP11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 METTL21CQ5VZV1 264 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 Q6ZPA2 131 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 Q6ZTK2 550 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 PTCHD4Q6ZW05 846 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 VTCN1Q7Z7D3 282 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 FAM46AQ96IP4 442 aaKnown RBP11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 GPX7Q96SL4 187 aaPredicted RBP11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 PITX2Q99697 317 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ATF6BQ99941 703 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 C1orf123Q9NWV4 160 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 ZNRD1Q9P1U0 126 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 AURKCQ9UQB9 309 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 IER3IP1Q9Y5U9 82 aa11.81□□□□□ -0.52
UPF3AP2-201ENST00000457924 MRASO14807 208 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 PTP4A3O75365 173 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 PRB2P02812 416 aaPredicted RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 OPN1MWP04001 364 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 OPN1MW2P0DN77 364 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 OPN1MW3P0DN78 364 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 EEF1B2P24534 225 aaKnown RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 MDH1P40925 334 aaKnown RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 CDKN2AP42771 156 aaKnown RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 RPS6KA3P51812 740 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 TRAP1Q12931 704 aaKnown RBP11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 HERPUD1Q15011 391 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
UPF3AP2-201ENST00000457924 NAA40Q86UY6 237 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms