RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CATP04040 527 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 IRF2P14316 349 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PNLIPP16233 465 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HIST1H1TP22492 207 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HRH1P35367 487 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 LBX1P52954 281 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NDUFA6P56556 154 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 NHLH2Q02577 135 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TNFRSF9Q07011 255 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2F1Q13607 317 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 C9orf64Q5T6V5 341 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ABHD17CQ6PCB6 329 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OVCH1Q7RTY7 1134 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 CARFQ8N187 725 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FBXO22Q8NEZ5 403 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 DTD1Q8TEA8 209 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TCEAL4Q96EI5 215 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 PHYHIPLQ96FC7 376 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ZC2HC1AQ96GY0 325 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC35G5Q96KT7 338 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 CD180Q99467 661 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC46A2Q9BY10 475 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPL22Q9NWU5 206 aaKnown RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OR14J1Q9UGF5 321 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HS3ST2Q9Y278 367 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ADAMTS4O75173 837 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MMP7P09237 267 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 OR13C7P0DN81 318 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 CEACAM1P13688 526 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FABP4P15090 132 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 GZMHP20718 246 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 UCP3P55916 312 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 IL13RA1P78552 427 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 MFAP5Q13361 173 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC9A3R2Q15599 337 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 DECR1Q16698 335 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 SP6Q3SY56 376 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 LYPLAL1Q5VWZ2 237 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 IKBIPQ70UQ0 350 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 RANBP3LQ86VV4 465 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 HSPA12BQ96MM6 686 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 RTBDNQ9BSG5 229 aaPredicted RBP4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 ZDHHC6Q9H6R6 413 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FBLN5Q9UBX5 448 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 FBXL17Q9UF56 701 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 TP53TG5Q9Y2B4 290 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 IGF2RP11717 2491 aa4.03□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A1W2PR80 420 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF264O43296 627 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 XRCC2O43543 280 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 DUSP11O75319 330 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 GALTP07902 379 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 HOXB2P14652 356 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 CTNNB1P35222 781 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RPS10P46783 165 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 EMDP50402 254 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PRPS1P60891 318 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RPS4XP62701 263 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 MIDNQ504T8 468 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 UBE2NLQ5JXB2 153 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 TSPO2Q5TGU0 170 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PAPD4Q6PIY7 484 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 CLEC18BQ6UXF7 455 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC25A42Q86VD7 318 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 FAM3DQ96BQ1 224 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ZBTB8AQ96BR9 441 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 S100A16Q96FQ6 103 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 C4orf45Q96LM5 186 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF607Q96SK3 696 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 FAAP24Q9BTP7 215 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 WNT5BQ9H1J7 359 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SYT4Q9H2B2 425 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PILRAQ9UKJ1 303 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RAB22AQ9UL26 194 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 MRPS33Q9Y291 106 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PKD1L2Q7Z442 2459 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 CPAMD8Q8IZJ3 1885 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC22A31A6NKX4 558 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 WRBO00258 174 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PHYHO14832 338 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 GEMIN2O14893 280 aaKnown RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ZNF14P17017 642 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RAB6AP20340 208 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 PRSS3P35030 304 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RUNX2Q13950 521 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RSU1Q15404 277 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RTL6Q6ICC9 239 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 LINC00114Q6XXX2 140 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 TRAPPC5Q8IUR0 188 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 NUP43Q8NFH3 380 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 RAB39BQ96DA2 213 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 MALSU1Q96EH3 234 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SMCO4Q9NRQ5 59 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ZFHX2Q9C0A1 2572 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 CHD6Q8TD26 2715 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 DUXAA6NLW8 204 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 SLC33A1O00400 549 aaPredicted RBP4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 P2RX6O15547 441 aa4.02□□□□□ -1.77
DEPDC1-202ENST00000456315 ERI3O43414 337 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms