RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TDGF1P3P51864 188 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 AP1S2P56377 157 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 OR4D2P58180 307 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PUDPQ08623 228 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 RIPPLY1Q0D2K3 151 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 GK3PQ14409 553 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 ABRAXAS2Q15018 415 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 NSDHLQ15738 373 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 CYP51A1Q16850 503 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 CNPY1Q3B7I2 92 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 ALKBH6Q3KRA9 238 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 C6orf226Q5I0X4 101 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 DCST2Q5T1A1 773 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 EMBQ6PCB8 327 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 CCDC137Q6PK04 289 aaKnown RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PAQR6Q6TCH4 344 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 TMEM205Q6UW68 189 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 C19orf35Q6ZS72 473 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 TGIF2LXQ8IUE1 241 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 EGFL6Q8IUX8 553 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 DHRSXQ8N5I4 330 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF614Q8N883 585 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 SPATA4Q8NEY3 305 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 OR1L6Q8NGR2 347 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 ITLN2Q8WWU7 325 aaPredicted RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 TAF15Q92804 592 aaKnown RBP eCLIP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PKNOX2Q96KN3 472 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 IMMP1LQ96LU5 166 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 SERPINB12Q96P63 405 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 CYTH2Q99418 400 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 NAT9Q9BTE0 207 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 TM2D1Q9BX74 207 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 GFRA4Q9GZZ7 299 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 RHBGQ9H310 441 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PARVBQ9HBI1 364 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 NEK6Q9HC98 313 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 FAM120CQ9NX05 1096 aaKnown RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 KLHL28Q9NXS3 571 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PRODH2Q9UF12 536 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 FBXO5Q9UKT4 447 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PSME2Q9UL46 239 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PDE10AQ9Y233 779 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 RASD1Q9Y272 281 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 USP9YO00507 2555 aaPredicted RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 DCHS2Q6V1P9 2916 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 GTF3C1Q12789 2109 aa3.43□□□□□ -1.86
LINC00393-202ENST00000452852 PHF3Q92576 2039 aaKnown RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 SPTBN1Q01082 2364 aaKnown RBP3.43□□□□□ -1.86
LINC00393-202ENST00000452852 NCOA6Q14686 2063 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 EML6Q6ZMW3 1958 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 IGLV7-46A0A075B6I9 117 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 IGHV2-70DA0A0C4DH43 119 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF860A6NHJ4 632 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 USP27XA6NNY8 438 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 GABRR3A8MPY1 467 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 A8MXK9 166 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 H0YIV9 168 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 KLRC4-KLRK1H3BQV0 150 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 WRBO00258 174 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 PGRMC1O00264 195 aaKnown RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 LSM1O15116 133 aaKnown RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CDC40O60508 579 aaKnown RBP eCLIP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 RAMP3O60896 148 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CST1P01037 141 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 GAPDHP04406 335 aaKnown RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF24P17028 368 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 COILP38432 576 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 MAGEA6P43360 314 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 VEGFCP49767 419 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CSNK1G2P78368 415 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CD300CQ08708 224 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 FCN2Q15485 313 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 PPP1R3AQ16821 1122 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF630Q2M218 657 aaPredicted RBP3.42□□□□□ -1.86
LINC00393-202ENST00000452852 C17orf58Q2M2W7 97 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 SPANXN3Q5MJ09 141 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 LGSNQ5TDP6 509 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ANKRD22Q5VYY1 191 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 DUPD1Q68J44 220 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 PVRIGQ6DKI7 326 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 SPINK14Q6IE38 97 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 FAM45BPQ6NSW5 357 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 H3F3CQ6NXT2 135 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 FRA10AC1Q70Z53 315 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 PRSS41Q7RTY9 318 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 VN1R4Q7Z5H5 301 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 LRRTM1Q86UE6 522 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 TPRA1Q86W33 373 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 SLC26A11Q86WA9 606 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 RNF130Q86XS8 419 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 CRLF3Q8IUI8 442 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 TMEM156Q8N614 296 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 C15orf54Q8N8G6 183 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 ZNF740Q8NDX6 193 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 PLPP5Q8NEB5 264 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 OR4Q3Q8NH05 313 aa3.42□□□□□ -1.86
LINC00393-202ENST00000452852 FAM45AQ8TCE6 357 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms