RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 YES1P07947 543 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 FCGR2AP12318 317 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 RAB3AP20336 220 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 TPTEP56180 551 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 AP3S2P59780 193 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 CEACAM16Q2WEN9 425 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 C1orf100Q5SVJ3 147 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM166AQ6J272 317 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM57BQ71RH2 274 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 LINGO2Q7L985 606 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC22A24Q8N4F4 322 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 DUSP18Q8NEJ0 188 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 OR1M1Q8NGA1 313 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 OR52H1Q8NGJ2 320 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 OR51E1Q8TCB6 317 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 SMIM4Q8WVI0 70 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 TRIM63Q969Q1 353 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 PTX4Q96A99 478 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM3DQ96BQ1 224 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 C10orf35Q96D05 121 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF799Q96GE5 643 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 ALKBH3Q96Q83 286 aaPredicted RBP9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 UQCC2Q9BRT2 126 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 PLEKHA1Q9HB21 404 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 ATPIF1Q9UII2 106 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF175Q9Y473 711 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 TIMM10BQ9Y5J6 103 aa9.28□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A1B0GTI1 187 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A1B0GVC2 190 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 A6NIN4 97 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF587BE7ETH6 402 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 XRCC3O43542 346 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 DOK2O60496 412 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 CEACAM4O75871 244 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 ITGA5P08648 1049 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 GSTT2BP0CG30 244 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 NTF4P34130 210 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC6A9P48067 706 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 POU3F4P49335 361 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 SRSF6Q13247 344 aaKnown RBP9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 DYRK1AQ13627 763 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 DEFB109BQ30KR1 87 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 C2orf76Q3KRA6 126 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 ASPHD2Q6ICH7 369 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 ANKRD16Q6P6B7 361 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 SLC16A14Q7RTX9 510 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 PRSS45Q7RTY3 260 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 JAGN1Q8N5M9 183 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 OR51D1Q8NGF3 324 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 OR1J2Q8NGS2 313 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 CHAC2Q8WUX2 184 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 FCAMRQ8WWV6 532 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 DEDD2Q8WXF8 326 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 YIPF5Q969M3 257 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 FBXO17Q96EF6 278 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 NEURL2Q9BR09 285 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 DEFB127Q9H1M4 99 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 OR10A2Q9H208 303 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 RNF121Q9H920 327 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 GPR84Q9NQS5 396 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF391Q9UJN7 358 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 CACNG2Q9Y698 323 aa9.27□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A0A6YYH2 397 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 OR6C6A6NF89 314 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 A6NJ64 397 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 F5H5K5 113 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 SCGNO76038 276 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 IGHG3P01860 377 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ITGB2P05107 769 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 B4GALT1P15291 398 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ARSBP15848 533 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF24P17028 368 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 WT1P19544 449 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 SPOCK1Q08629 439 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 FAM189A2Q15884 450 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 SLC36A2Q495M3 483 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 GLYATL3Q5SZD4 288 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 TSPO2Q5TGU0 170 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF529Q6P280 563 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF813Q6ZN06 617 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 KRT74Q7RTS7 529 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ASCL5Q7RTU5 278 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ADGRE4PQ86SQ3 457 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 TUSC5Q8IXB3 177 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ZADH2Q8N4Q0 377 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 DTX3Q8N9I9 347 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 OR1F12Q8NHA8 337 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 FNDC9Q8TBE3 224 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 APH1AQ96BI3 265 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 WDYHV1Q96HA8 205 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 METTL17Q9H7H0 456 aaPredicted RBP9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 CALHM2Q9HA72 323 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 GLRX2Q9NS18 164 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 COPZ2Q9P299 210 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 UPB1Q9UBR1 384 aa9.27□□□□□ -0.93
VIPAS39-203ENST00000448935 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms