RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CHST11Q9NPF2 352 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 RANBP2P49792 3224 aaKnown RBP16.96■□□□□ 0.31
SDCBP-204ENST00000447182 ANKUB1A6NFN9 424 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF217O75362 1048 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 PMP2P02689 132 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 GSTP1P09211 210 aaKnown RBP16.96■□□□□ 0.3
SDCBP-204ENST00000447182 ADCYAP1P18509 176 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 APOBEC1P41238 236 aaKnown RBP16.96■□□□□ 0.3
SDCBP-204ENST00000447182 POU3F1Q03052 451 aaPredicted RBP16.96■□□□□ 0.3
SDCBP-204ENST00000447182 VAX1Q5SQQ9 334 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 AWAT2Q6E213 333 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 BOLLQ8N9W6 283 aaKnown RBP16.96■□□□□ 0.3
SDCBP-204ENST00000447182 RNF141Q8WVD5 230 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 C11orf40Q8WZ69 217 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 ARL11Q969Q4 196 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 FANCFQ9NPI8 374 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 CYTL1Q9NRR1 136 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 KLHL13Q9P2N7 655 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 PISDQ9UG56 409 aa16.96■□□□□ 0.3
SDCBP-204ENST00000447182 CARHSP1Q9Y2V2 147 aaKnown RBP16.96■□□□□ 0.3
SDCBP-204ENST00000447182 A0A0B4J2A0 478 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF93P35789 620 aaPredicted RBP16.95■□□□□ 0.3
SDCBP-204ENST00000447182 TLE3Q04726 772 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 SCRN3Q0VDG4 424 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 ACTBL2Q562R1 376 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 ANGPTL5Q86XS5 388 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 ARRDC1Q8N5I2 433 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 OR10H5Q8NGA6 315 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 OR10S1Q8NGN2 331 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 OR13C9Q8NGT0 318 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 LPAR5Q9H1C0 372 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 MED29Q9NX70 200 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 CTSFQ9UBX1 484 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 SHPKQ9UHJ6 478 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 GPR132Q9UNW8 380 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 GON4LQ3T8J9 2241 aa16.95■□□□□ 0.3
SDCBP-204ENST00000447182 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 C13orf42A0A1B0GVH6 325 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 H7C2Y5 167 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 ACTL6AO96019 429 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 LYL1P12980 280 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 EMP2P54851 167 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 HFEQ30201 348 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 LDLRAD3Q86YD5 345 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 OR1L3Q8NH93 324 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 FOXQ1Q9C009 403 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 RAB18Q9NP72 206 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF629Q9UEG4 869 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 SHISA7A6NL88 538 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 HSD11B2P80365 405 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 DCDP81605 110 aaKnown RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 FOXK1P85037 733 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 STK11Q15831 433 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 MICBQ29980 383 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 PTCRAQ6ISU1 281 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 DRAM2Q6UX65 266 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 NAA40Q86UY6 237 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 ZSCAN4Q8NAM6 433 aaPredicted RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 RRNAD1Q96FB5 475 aaKnown RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 ZC3H10Q96K80 434 aaKnown RBP16.94■□□□□ 0.3
SDCBP-204ENST00000447182 NICN1Q9BSH3 213 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 MOB1AQ9H8S9 216 aa16.94■□□□□ 0.3
SDCBP-204ENST00000447182 A0A0A6YYD4 124 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 KCNAB3O43448 404 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SUMO3P55854 103 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 C17orf67Q0P5P2 114 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 AIMP2Q13155 320 aaKnown RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 GUCA2BQ16661 112 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF784Q8NCA9 323 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 PAQR8Q8TEZ7 354 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 PHF3Q92576 2039 aaKnown RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 C1orf147Q96MC9 270 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 C5orf66Q9H5L9 145 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 H0YIZ8 118 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 FAM157CP0CG43 387 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 EN2P19622 333 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SLC6A9P48067 706 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SHHQ15465 462 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SGCAQ16586 387 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 NKAPLQ5M9Q1 402 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 DHRS7BQ6IAN0 325 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-204ENST00000447182 OGFOD3Q6PK18 319 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 COX15Q7KZN9 410 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 RTN4RL2Q86UN3 420 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 PRSS58Q8IYP2 241 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 ZNF101Q8IZC7 436 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 CARFQ8N187 725 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM230Q96A57 120 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 DDIT4LQ96D03 193 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SLC2A4RGQ9NR83 387 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 MMP26Q9NRE1 261 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SUSD2Q9UGT4 822 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 B3GALT5Q9Y2C3 310 aa16.93■□□□□ 0.3
SDCBP-204ENST00000447182 SFT2D2O95562 160 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 HIST1H1DP16402 221 aaKnown RBP16.92■□□□□ 0.3
SDCBP-204ENST00000447182 LAP3P28838 519 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 RNF4P78317 190 aa16.92■□□□□ 0.3
SDCBP-204ENST00000447182 TMEM71Q6P5X7 295 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms