RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 KRTAP17-1Q9BYP8 105 aa11.34□□□□□ -0.59
LINC00642-202ENST00000442515 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
LINC00642-202ENST00000442515 C1orf123Q9NWV4 160 aa11.34□□□□□ -0.59
LINC00642-202ENST00000442515 TRAV27A0A087WT01 109 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 E9PQ18 207 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 C3orf84H3BNL1 204 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 OR5F1O95221 314 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 ZNF26P17031 533 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 CA6P23280 308 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 LSM6P62312 80 aaKnown RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 SLC35A2P78381 396 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 PIN1Q13526 163 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 MESTQ5EB52 335 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 COLCA1Q6ZS62 124 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 ZNF826PQ6ZT77 177 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 MICU2Q8IYU8 434 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 SPRYD4Q8WW59 207 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 DMRTB1Q96MA1 342 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 NKX3-1Q99801 234 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 COQ7Q99807 217 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 PAIP2Q9BPZ3 127 aaKnown RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 THAP1Q9NVV9 213 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 NOP16Q9Y3C1 178 aaKnown RBP11.33□□□□□ -0.6
LINC00642-202ENST00000442515 U3KQK5 164 aa11.33□□□□□ -0.6
LINC00642-202ENST00000442515 hCG_1807616A0A1W2PRN6 198 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 A0A1W2PRX2 142 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 A6NLC8 198 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 POLR3GO15318 223 aaPredicted RBP11.32□□□□□ -0.6
LINC00642-202ENST00000442515 TNFRSF1BP20333 461 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 PAX6P26367 422 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 MRPL19P49406 292 aaKnown RBP11.32□□□□□ -0.6
LINC00642-202ENST00000442515 CRYBA2P53672 197 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 STX1BP61266 288 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 EGFEM1PQ0D2K5 195 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 NCR3LG1Q68D85 454 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 PGAP1Q75T13 922 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
LINC00642-202ENST00000442515 FAM216BQ8N7L0 139 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 OR51A7Q8NH64 312 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 SLC26A7Q8TE54 656 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 SLCO4A1Q96BD0 722 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 BPIFA2Q96DR5 249 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
LINC00642-202ENST00000442515 CCL13Q99616 98 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 HDHD2Q9H0R4 259 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 AURKCQ9UQB9 309 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 POLR1DQ9Y2S0 133 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 ADAM18Q9Y3Q7 739 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 PCDHGB5Q9Y5G0 923 aa11.32□□□□□ -0.6
LINC00642-202ENST00000442515 PRSS37A4D1T9 235 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 XKRYO14609 159 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 LHBP01229 141 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 PF4V1P10720 104 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 IFI30P13284 250 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 BMXP51813 675 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 IKZF1Q13422 519 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 FHL1Q13642 323 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 SELPLGQ14242 412 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 WDR38Q5JTN6 314 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 LIAT1Q6ZQX7 453 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 GLB1L2Q8IW92 636 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 Q8N2B8 174 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 ACOT11Q8WXI4 607 aaPredicted RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 DCTN5Q9BTE1 182 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 POLR2J2Q9GZM3 115 aaKnown RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 SLC22A4Q9H015 551 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 RERGLQ9H628 205 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 TMBIM4Q9HC24 238 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 CCDC167Q9P0B6 97 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 PRPF19Q9UMS4 504 aaKnown RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 COA3Q9Y2R0 106 aaPredicted RBP11.31□□□□□ -0.6
LINC00642-202ENST00000442515 SH3GLB1Q9Y371 365 aa11.31□□□□□ -0.6
LINC00642-202ENST00000442515 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 HMGB1P1B2RPK0 211 aaPredicted RBP11.3□□□□□ -0.6
LINC00642-202ENST00000442515 PF4P02776 101 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 GRPP07492 148 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 MTPNP58546 118 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 ECH1Q13011 328 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 AANATQ16613 207 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 PCK2Q16822 640 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 MICBQ29980 383 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 RSPO1Q2MKA7 263 aaPredicted RBP11.3□□□□□ -0.6
LINC00642-202ENST00000442515 KRTAP27-1Q3LI81 207 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 KRT71Q3SY84 523 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 AGBL2Q5U5Z8 902 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 HCP5Q6MZN7 132 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 DLEU7Q6UYE1 221 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 SLC36A1Q7Z2H8 476 aa11.3□□□□□ -0.6
LINC00642-202ENST00000442515 MRPL21Q7Z2W9 205 aaKnown RBP11.3□□□□□ -0.6
LINC00642-202ENST00000442515 GJC3Q8NFK1 279 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms