RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CPNE2Q96FN4 548 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-206ENST00000441580 FAM71F1Q96KD3 344 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-206ENST00000441580 NUDT16L1Q9BRJ7 211 aaKnown RBP11.57□□□□□ -0.56
CPSF4-206ENST00000441580 PRRG4Q9BZD6 226 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 RGCCQ9H4X1 137 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 ZDHHC11Q9H8X9 412 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 SCPEP1Q9HB40 452 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 CGGBP1Q9UFW8 167 aaPredicted RBP11.57□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF175Q9Y473 711 aa11.57□□□□□ -0.56
CPSF4-206ENST00000441580 VCANP13611 3396 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 TRGV5A0A0B4J1U4 118 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 TRAV17A0A0B4J275 112 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 A0A0B4J293 547 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 CIB4A0PJX0 185 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 ANKRD20A5PA0PJZ0 165 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 DCDC2BA2VCK2 349 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 METTL21EPA6NDL7 271 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 F5H5K5 113 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 RPL36A-HNRNPH2H7BZ11 118 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 LMX1BO60663 402 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 ALX3O95076 343 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 DHFRP00374 187 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 ALDOBP05062 364 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 UBBP0CG47 229 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 SRYQ05066 204 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 C2orf76Q3KRA6 126 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 KRTAP27-1Q3LI81 207 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 UTS2BQ765I0 119 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 SLC16A14Q7RTX9 510 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.56□□□□□ -0.56
CPSF4-206ENST00000441580 OR14K1Q8NGZ2 314 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 SLC7A6Q92536 515 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 APH1AQ96BI3 265 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 CHST5Q9GZS9 411 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 LDAHQ9H6V9 325 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 NEK6Q9HC98 313 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 RAB22AQ9UL26 194 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 RHBDD3Q9Y3P4 386 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 TIMM10BQ9Y5J6 103 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 V9GYS6 101 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 CACNA1CQ13936 2221 aa11.56□□□□□ -0.56
CPSF4-206ENST00000441580 NKX2-8O15522 239 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 TMIGD3P0DMS9 266 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 CPN1P15169 458 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF24P17028 368 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF32P17041 273 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 HTR5AP47898 357 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 SRP9P49458 86 aaKnown RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 RAB25P57735 213 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 SNTB2Q13425 540 aaKnown RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 GFOD2Q3B7J2 385 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 AWAT2Q6E213 333 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 BTN2A1Q7KYR7 527 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF627Q7L945 461 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 DPPA2Q7Z7J5 298 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 PNLDC1Q8NA58 520 aaKnown RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 UBASH3BQ8TF42 649 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 FAM46BQ96A09 425 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 LRFN3Q9BTN0 628 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 OR2H1Q9GZK4 316 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ATG5Q9H1Y0 275 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 NUDT15Q9NV35 164 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
CPSF4-206ENST00000441580 LIPGQ9Y5X9 500 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 ALG5Q9Y673 324 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 MED12Q93074 2177 aa11.55□□□□□ -0.56
CPSF4-206ENST00000441580 C7orf66A4D0T2 115 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 H7C417 338 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 TM4SF5O14894 197 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 PRAF2O60831 178 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 RBBP9O75884 186 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 TCRBP04435 133 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 ITGB2P05107 769 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 LPLP06858 475 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 YES1P07947 543 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 HCKP08631 526 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 GSK3AP49840 483 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 EFNB2P52799 333 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 PMPCAQ10713 525 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 CLN3Q13286 438 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 CARTPTQ16568 116 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 OR5AS1Q8N127 324 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 OR4D6Q8NGJ1 314 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 OR6F1Q8NGZ6 308 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 OR56B4Q8NH76 319 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 FNDC9Q8TBE3 224 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 AKAP1Q92667 903 aaKnown RBP eCLIP11.54□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF775Q96BV0 537 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-206ENST00000441580 ZNF837Q96EG3 531 aaPredicted RBP11.54□□□□□ -0.56
CPSF4-206ENST00000441580 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 CNTD2Q9H8S5 307 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 HRASLSQ9HDD0 168 aa11.54□□□□□ -0.56
CPSF4-206ENST00000441580 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms