RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 RNF115Q9Y4L5 304 aa10.95□□□□□ -0.66
SCLT1-202ENST00000439369 CCRL2O00421 344 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ABCD4O14678 606 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 INMTO95050 263 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ZFPL1O95159 310 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 HSMCR30P0CW71 290 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ACHEP22303 614 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GALP22466 123 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GLRXP35754 106 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GTF2A1P52655 376 aaPredicted RBP10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GP2P55259 537 aaKnown RBP10.94□□□□□ -0.66
SCLT1-202ENST00000439369 PPP1CBP62140 327 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 SNAI3Q3KNW1 292 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 YIF1BQ5BJH7 314 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 FBXW12Q6X9E4 464 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 RFPL4BQ6ZWI9 263 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 NAA40Q86UY6 237 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 PHC2Q8IXK0 858 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF101Q8IZC7 436 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF676Q8N7Q3 588 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 PLPP7Q8NBV4 271 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ABHD4Q8TB40 342 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GHSRQ92847 366 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 PGLYRP3Q96LB9 341 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF442Q9H7R0 627 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 BRD7Q9NPI1 651 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 NDUFB11Q9NX14 153 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 GTF2A1LQ9UNN4 478 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 SLC22A13Q9Y226 551 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF281Q9Y2X9 895 aa10.94□□□□□ -0.66
SCLT1-202ENST00000439369 SIRT4Q9Y6E7 314 aaPredicted RBP10.94□□□□□ -0.66
SCLT1-202ENST00000439369 VSTM5A8MXK1 200 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 ATP6V1G2-DDX39BF2Z307 99 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 TBX1O43435 398 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 MTRF1O75570 445 aaKnown RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 ATE1O95260 518 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SERPINA3P01011 423 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 NGFP01138 241 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SLC2A1P11166 492 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 RAC2P15153 192 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SELEP16581 610 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 LOXP28300 417 aaPredicted RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 GABRA5P31644 462 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 DDOSTP39656 456 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SNTB2Q13425 540 aaKnown RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 DOC2BQ14184 412 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 TSTQ16762 297 aaKnown RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 ZBTB37Q5TC79 503 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 MBNL2Q5VZF2 373 aaKnown RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 ADAM5Q6NVV9 412 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SLC22A25Q6T423 547 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 DOK3Q7L591 496 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 OR1J1Q8NGS3 322 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 GPR148Q8TDV2 347 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SGK3Q96BR1 496 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 C10orf35Q96D05 121 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 REEP6Q96HR9 211 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 REPIN1Q9BWE0 567 aaKnown RBP10.93□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF319Q9P2F9 582 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 HHLA2Q9UM44 414 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 STARD10Q9Y365 291 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
SCLT1-202ENST00000439369 SMG1Q96Q15 3661 aaKnown RBP10.92□□□□□ -0.66
SCLT1-202ENST00000439369 A0A1B0GTI1 187 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 A0A1B0GVI7 797 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 LOC107986453A0A1B0GWG9 222 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 SHISA9B4DS77 424 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 SIAH2O43255 324 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 CLDN1O95832 211 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 FAM157BP0CG42 384 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF250P15622 560 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 SLC3A1Q07837 685 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 SNTB1Q13884 538 aaKnown RBP10.92□□□□□ -0.66
SCLT1-202ENST00000439369 OR8B8Q15620 311 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF718Q3SXZ3 478 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 TIMM50Q3ZCQ8 353 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 GLYATL3Q5SZD4 288 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 LIPKQ5VXJ0 399 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 CD200R1LQ6Q8B3 271 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 MRPL21Q7Z2W9 205 aaKnown RBP10.92□□□□□ -0.66
SCLT1-202ENST00000439369 OR13F1Q8NGS4 319 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 OR51E1Q8TCB6 317 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 PHYHIPQ92561 330 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
SCLT1-202ENST00000439369 GPR84Q9NQS5 396 aa10.92□□□□□ -0.66
SCLT1-202ENST00000439369 TRBV5-5A0A0J9YX44 114 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 hCG_38984A0A1B0GV85 526 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 FAM221AA4D161 298 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 A6NNC1 897 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 SYT7O43581 403 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 GATBO75879 557 aaKnown RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 DHRS3O75911 302 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 HLA-DPB1P04440 258 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 COX6B1P14854 86 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 MAPK3P27361 379 aaPredicted RBP10.91□□□□□ -0.66
SCLT1-202ENST00000439369 LIPAP38571 399 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 MAP2K3P46734 347 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 EVX1P49640 407 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 SELENOVP59797 346 aa10.91□□□□□ -0.66
SCLT1-202ENST00000439369 ZNF92Q03936 586 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms