RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SLC25A28Q96A46 364 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 HAVCR1Q96D42 359 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 GPX7Q96SL4 187 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 C12orf57Q99622 126 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ALKBH4Q9NXW9 302 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 WIF1Q9Y5W5 379 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 A0A0G2JMM0 328 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 IGHV3-64DA0A0J9YX35 117 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 A0A1W2PPB8 328 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 A0A1W2PRS3 328 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 KIR3DP1A8MWS1 328 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 TNFSF11O14788 317 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 GALP22466 123 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 AWAT2Q6E213 333 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 BRICD5Q6PL45 260 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 UNQ6126/PRO20091Q6UXV3 157 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 CLRN3Q8NCR9 226 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 BPIFCQ8NFQ6 507 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 MIB2Q96AX9 1013 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ARRDC1-AS1Q9H2J1 176 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 UCK1Q9HA47 277 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ATPIF1Q9UII2 106 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 NSG1A0A0A6YYJ2 146 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 GGT3PA6NGU5 568 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ACOT7O00154 380 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF20P17024 532 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 IL10RAQ13651 578 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 GLT8D1Q68CQ7 371 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF626Q68DY1 528 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF660Q6AZW8 331 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF704Q6ZNC4 412 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 FOXRED2Q8IWF2 684 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 PLPP5Q8NEB5 264 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ZNF519Q8TB69 540 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 SPACA9Q96E40 222 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 MRPS24Q96EL2 167 aaKnown RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 ALKBH3Q96Q83 286 aaPredicted RBP13.84□□□□□ -0.19
SCARF1-203ENST00000434376 DUSP23Q9BVJ7 150 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 TMEM231Q9H6L2 316 aa13.84□□□□□ -0.19
SCARF1-203ENST00000434376 LY6G6EA0A0G2JKS1 128 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 OR5H15A6NDH6 313 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 DXOO77932 396 aaKnown RBP13.83□□□□□ -0.2
SCARF1-203ENST00000434376 HTR3BO95264 441 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 MT-ATP6P00846 226 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RAB3AP20336 220 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 FAUP35544 74 aaKnown RBP13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RAG2P55895 527 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 LINC00696Q6ZRV3 163 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RHOUQ7L0Q8 258 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 CBLN2Q8IUK8 224 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 GALNT16Q8N428 558 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 PIGTQ969N2 578 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 NICN1Q9BSH3 213 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 NOP16Q9Y3C1 178 aaKnown RBP13.83□□□□□ -0.2
SCARF1-203ENST00000434376 U3KQA8 63 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 AKR1C4P17516 323 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RAB12Q6IQ22 244 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 TFAP2EQ6VUC0 442 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 CDH26Q8IXH8 852 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 AGBL5Q8NDL9 886 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 NFAM1Q8NET5 270 aaPredicted RBP13.83□□□□□ -0.2
SCARF1-203ENST00000434376 OR2AE1Q8NHA4 323 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 OR14L1PQ8NHC6 308 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 HAVCR2Q8TDQ0 301 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RNF128Q8TEB7 428 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 NKX6-2Q9C056 277 aaPredicted RBP13.83□□□□□ -0.2
SCARF1-203ENST00000434376 GPR84Q9NQS5 396 aa13.83□□□□□ -0.2
SCARF1-203ENST00000434376 RAB3DO95716 219 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 NAT2P11245 290 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 PMPCAQ10713 525 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 BAMBIQ13145 260 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 UNQ9370/PRO34162Q6UXP9 181 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 BAIAP2L2Q6UXY1 529 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ANGPTL5Q86XS5 388 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 SLC22A8Q8TCC7 542 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ASB10Q8WXI3 467 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 CNTD2Q9H8S5 307 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 GDF2Q9UK05 429 aaPredicted RBP13.82□□□□□ -0.2
SCARF1-203ENST00000434376 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 KANTRA0A1W2PQU2 76 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ANKUB1A6NFN9 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 LIPT2A6NK58 231 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 A8MXK9 166 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF254O75437 659 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 PDSS1Q5T2R2 415 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 PMS2CLQ68D20 193 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 OVCH2Q7RTZ1 564 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 RABEPKQ7Z6M1 372 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 WDSUB1Q8N9V3 476 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 POC1BQ8TC44 478 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 WBP1Q96G27 269 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 COMMD9Q9P000 198 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF319Q9P2F9 582 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 NPTNQ9Y639 398 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 CEP192Q8TEP8 1941 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 A0A1B0GW55 424 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 F5H0A9 414 aaPredicted RBP13.82□□□□□ -0.2
SCARF1-203ENST00000434376 NPIPB7O75200 414 aa13.82□□□□□ -0.2
SCARF1-203ENST00000434376 NDUFB6O95139 128 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms