RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 LUMP51884 338 aaPredicted RBP10.05□□□□□ -0.8
USP4-205ENST00000431357 LBX1P52954 281 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 CLDN6P56747 220 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 CYCSP99999 105 aaKnown RBP10.05□□□□□ -0.8
USP4-205ENST00000431357 SQSTM1Q13501 440 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 ACTBL2Q562R1 376 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 PAN3Q58A45 887 aaKnown RBP10.05□□□□□ -0.8
USP4-205ENST00000431357 FAM76BQ5HYJ3 339 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 UQCC3Q6UW78 93 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 LANCL3Q6ZV70 420 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 ADPRHL1Q8NDY3 354 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 NUBPLQ8TB37 319 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 ZNF501Q96CX3 271 aaPredicted RBP10.05□□□□□ -0.8
USP4-205ENST00000431357 CDC6Q99741 560 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 GAREM1Q9H706 876 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 BARX1Q9HBU1 254 aaPredicted RBP10.05□□□□□ -0.8
USP4-205ENST00000431357 MED29Q9NX70 200 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 TAS2R3Q9NYW6 316 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
USP4-205ENST00000431357 LOC101059948A0A1B0GTJ6 334 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 EFSO43281 561 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 IFNA4P05014 189 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 DCNP07585 359 aaKnown RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 GSTP1P09211 210 aaKnown RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 ZNF20P17024 532 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ATP1B3P54709 279 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 BIDP55957 195 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 SNTB1Q13884 538 aaKnown RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 KIF26BQ2KJY2 2108 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 HYAL4Q2M3T9 481 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 SLC25A53Q5H9E4 307 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 TMPRSS9Q7Z410 1059 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ZNF565Q8N9K5 539 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 SEC22AQ96IW7 307 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 CTSFQ9UBX1 484 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 TRAV20A0A0B4J274 112 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 TEX46H3BTG2 121 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 WRBO00258 174 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 CCSO14618 274 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 PIAS2O75928 621 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 APOC3P02656 99 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 GP1BAP07359 652 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 HRH1P35367 487 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ZNF93P35789 620 aaPredicted RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 CASRP41180 1078 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 CX3CR1P49238 355 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 FBXW4P57775 412 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 CFHR1Q03591 330 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 AWAT2Q6E213 333 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 PGAP1Q75T13 922 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ANGPTL5Q86XS5 388 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 RNF138Q8WVD3 245 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 NUDCD2Q8WVJ2 157 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 MRGPRX4Q96LA9 322 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 MRPL13Q9BYD1 178 aaKnown RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 MS4A7Q9GZW8 240 aaPredicted RBP10.04□□□□□ -0.8
USP4-205ENST00000431357 LMAN1LQ9HAT1 526 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 SERINC1Q9NRX5 453 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 FGF21Q9NSA1 209 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
USP4-205ENST00000431357 CACNA1CQ13936 2221 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 DBX1A6NMT0 343 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 MPTX1A8MV57 137 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 ZNF878C9JN71 531 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 SULT2B1O00204 365 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 FOSL2P15408 326 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 GLB1P16278 677 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 PSMB6P28072 239 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 TSPAN7P41732 249 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 EMP2P54851 167 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 FOXF1Q12946 379 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 INPP5JQ15735 1006 aaPredicted RBP10.03□□□□□ -0.8
USP4-205ENST00000431357 PNLIPRP3Q17RR3 467 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 LRRC37A5PQ49AS3 106 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 OR52W1Q6IF63 320 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 COX15Q7KZN9 410 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 HOGA1Q86XE5 327 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 UEVLDQ8IX04 471 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 NFAM1Q8NET5 270 aaPredicted RBP10.03□□□□□ -0.8
USP4-205ENST00000431357 OR13C9Q8NGT0 318 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 OR2AJ1Q8NGZ0 328 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 OR4K15Q8NH41 348 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 STT3BQ8TCJ2 826 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 CMBLQ96DG6 245 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 SCGB3A2Q96PL1 93 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 NPAS1Q99742 590 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 NMES1Q9C002 83 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 SELENOIQ9C0D9 397 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 WDR13Q9H1Z4 485 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 PTGES2Q9H7Z7 377 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 A0A0B4J2A0 478 aa10.03□□□□□ -0.8
USP4-205ENST00000431357 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
USP4-205ENST00000431357 FABP1P07148 127 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms