RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 GJE1A6NN92 205 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 TNFRSF10AO00220 468 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DHHO43323 396 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 SLC2A1P11166 492 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ENPP1P22413 925 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 GNALP38405 381 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 TAS2R19P59542 299 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 RAC3P60763 192 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DHODHQ02127 395 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 EIF3IQ13347 325 aaKnown RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 CCDC92Q53HC0 331 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ACER2Q5QJU3 275 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 RAB12Q6IQ22 244 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 CRIP3Q6Q6R5 217 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF767PQ75MW2 155 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 LUZP2Q86TE4 346 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 OR51S1Q8NGJ8 323 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 OR13C9Q8NGT0 318 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 OR14K1Q8NGZ2 314 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 KCNE4Q8WWG9 221 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 JSRP1Q96MG2 331 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 STRADBQ9C0K7 418 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 CA10Q9NS85 328 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DEPPQ9NTK1 212 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 KLK13Q9UKR3 277 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 NPIPA2E9PIF3 369 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 NPIPA3F8WFD2 350 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 CREBL2O60519 120 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 P04436 131 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ERCC1P07992 297 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 RFPL3SP0C7P2 107 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ABOP16442 354 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 GSK3AP49840 483 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 IKZF1Q13422 519 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 TAF13Q15543 124 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ABLIM2Q6H8Q1 611 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DOK3Q7L591 496 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF627Q7L945 461 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 GALNT16Q8N428 558 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 DVL3Q92997 716 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 LYZL4Q96KX0 146 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 GINS4Q9BRT9 223 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 ALX4Q9H161 411 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 GPN1Q9HCN4 374 aaPredicted RBP12.29□□□□□ -0.44
HOXC4-202ENST00000430889 P4HTMQ9NXG6 502 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 SLC23A1Q9UHI7 598 aa12.29□□□□□ -0.44
HOXC4-202ENST00000430889 A0A0U1RQV5 110 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF716A6NP11 495 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 WDPCPO95876 746 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 TPOP07202 933 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 GIPP09681 153 aaPredicted RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 ZNF20P17024 532 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 DNASE1P24855 282 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 MPZP25189 248 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 NTF4P34130 210 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 MRPS34P82930 218 aaKnown RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 FOXO1Q12778 655 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 SGCAQ16586 387 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 LGALSLQ3ZCW2 172 aaPredicted RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 PGAP1Q75T13 922 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 OR2W3Q7Z3T1 314 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 ESX1Q8N693 406 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 ACBD4Q8NC06 268 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 DACT3Q96B18 629 aaPredicted RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 RADILQ96JH8 1075 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 MYOZ1Q9NP98 299 aaPredicted RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 MYEF2Q9P2K5 600 aaKnown RBP12.28□□□□□ -0.44
HOXC4-202ENST00000430889 MGAT4CQ9UBM8 478 aa12.28□□□□□ -0.44
HOXC4-202ENST00000430889 KMT2EQ8IZD2 1858 aa12.27□□□□□ -0.44
HOXC4-202ENST00000430889 IGKV1-9A0A0C4DH69 117 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 PRF1P14222 555 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 CLDN15P56746 228 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 FAM57BQ71RH2 274 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
HOXC4-202ENST00000430889 ZNF283Q8N7M2 679 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 OR52B4Q8NGK2 314 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 ZNF837Q96EG3 531 aaPredicted RBP12.27□□□□□ -0.45
HOXC4-202ENST00000430889 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 ANAPC10Q9UM13 185 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 V9GYS6 101 aa12.27□□□□□ -0.45
HOXC4-202ENST00000430889 A0A0A6YYD4 124 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 PINLYPA6NC86 204 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 OR5H15A6NDH6 313 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 METTL21EPA6NDL7 271 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 SCGNO76038 276 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 ALX3O95076 343 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 RAB3DO95716 219 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 ZNF93P35789 620 aaPredicted RBP12.26□□□□□ -0.45
HOXC4-202ENST00000430889 PER3P56645 1201 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 FAM27BQ5VT28 67 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 NAA40Q86UY6 237 aa12.26□□□□□ -0.45
HOXC4-202ENST00000430889 OR2T35Q8NGX2 323 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms