RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 TLNRD1Q9H1K6 362 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 GPR84Q9NQS5 396 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 STMND1H3BQB6 276 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 OR13C7P0DN81 318 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
SGMS1-203ENST00000429490 SGCBQ16585 318 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 TCEAL3Q969E4 200 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 CTHRC1Q96CG8 243 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 FOXQ1Q9C009 403 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■■■ 27
SGMS1-203ENST00000429490 ZFP57Q9NU63 452 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 TNFSF18Q9UNG2 199 aa12.31□□□□□ -0.44
SGMS1-203ENST00000429490 TRBV5-5A0A0J9YX44 114 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 A6NIZ1 184 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 OR6C76A6NM76 312 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 G3V3Y1 287 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 XRCC2O43543 280 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 FOXS1O43638 330 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 DIRAS3O95661 229 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 APOC1P02654 83 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 SPP1P10451 314 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 MPGP29372 298 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 RAB13P51153 203 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 RAP1BP61224 184 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 RAP1AP62834 184 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 ELAVL1Q15717 326 aaKnown RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 SP6Q3SY56 376 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 EXD3Q8N9H8 876 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 SUMF1Q8NBK3 374 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 HOXB13Q92826 284 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 S1PR5Q9H228 398 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 URGCP-MRPS24S4R325 110 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TNFSF14O43557 240 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 JMJD7P0C870 316 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 FCGR2AP12318 317 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 IL11P20809 199 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 KIR2DL1P43626 348 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 ASCL1P50553 236 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 SLC26A5P58743 744 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 EGR4Q05215 589 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 SKP2Q13309 424 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 LANCL3Q6ZV70 420 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TERB2Q8NHR7 220 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 DMRTA2Q96SC8 542 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 ANKRD10Q9NXR5 420 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 CD207Q9UJ71 328 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 COL4A4P53420 1690 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 CACNA1DQ01668 2161 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NUDT21O43809 227 aaKnown RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NXPH3O95157 252 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 IL33O95760 270 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 CRYBA1P05813 215 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 HSF1Q00613 529 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 ACY1Q03154 408 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 CLINT1Q14677 625 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TMEM176BQ3YBM2 270 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 JMJD6Q6NYC1 403 aaPredicted RBP12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TMPPEQ6ZT21 453 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 GRINAQ7Z429 371 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 KCNG3Q8TAE7 436 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NMNAT2Q9BZQ4 307 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 PBOV1Q9GZY1 135 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 LAT2Q9GZY6 243 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
SGMS1-203ENST00000429490 TRAV14DV4A0A0A6YYC5 116 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 PRSS44E7EML9 344 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 SOCS1O15524 211 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 CBX5P45973 191 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 NPBWR1P48145 328 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 LINC00518Q8N0U6 118 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 OR51F2Q8NH61 342 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 C11orf40Q8WZ69 217 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ARHGAP5-AS1Q96IT6 56 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 PLEK2Q9NYT0 353 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 PURGQ9UJV8 347 aaKnown RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 TRAV20A0A0B4J274 112 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 TRIM77I1YAP6 450 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 CRHP06850 196 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 HNF4GQ14541 408 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 H1FNTQ75WM6 255 aaPredicted RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 DDIT4LQ96D03 193 aa12.29□□□□□ -0.44
SGMS1-203ENST00000429490 EXOSC3Q9NQT5 275 aaKnown RBP12.29□□□□□ -0.44
SGMS1-203ENST00000429490 ESPL1Q14674 2120 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms