RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 NBL1P41271 181 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 RPS27P42677 84 aaKnown RBP9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CRYBA2P53672 197 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF718Q3SXZ3 478 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 KRTCAP3Q53RY4 240 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 SPATA46Q5T0L3 261 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CLRN3Q8NCR9 226 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 GJC3Q8NFK1 279 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ELP5Q8TE02 316 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 GPA33Q99795 319 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ESRP2Q9H6T0 727 aaKnown RBP9.55□□□□□ -0.88
TCOF1-204ENST00000427724 MMP25Q9NPA2 562 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ASH2LQ9UBL3 628 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 PILRAQ9UKJ1 303 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 MSRB2Q9Y3D2 182 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 GLAP06280 429 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CXCL3P19876 107 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 SLC2A5P22732 501 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 RAB2AP61019 212 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ACKR1Q16570 336 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 PRSS53Q2L4Q9 553 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 SLC25A35Q3KQZ1 300 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FAM74A1Q5RGS3 127 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 RPL22L1Q6P5R6 122 aaKnown RBP9.55□□□□□ -0.88
TCOF1-204ENST00000427724 BEND4Q6ZU67 534 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FAM46BQ96A09 425 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 WFDC6Q9BQY6 131 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 MARVELD1Q9BSK0 173 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CST11Q9H112 138 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FBXO34Q9NWN3 711 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1B0GV50 99 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 HSPB2A8KAH6 182 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FADS1O60427 444 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 SELENOFO60613 162 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 LILRB5O75023 590 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 RAB40ALP0C0E4 278 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 C1QTNF9P0C862 333 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 TCF15Q12870 199 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 TNK1Q13470 666 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 RAB11BQ15907 218 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 HSPB2Q16082 182 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CDNFQ49AH0 187 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FAAP20Q6NZ36 180 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF704Q6ZNC4 412 aaPredicted RBP9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF584Q8IVC4 421 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 METTL8Q9H825 291 aaKnown RBP9.55□□□□□ -0.88
TCOF1-204ENST00000427724 B3GALT5Q9Y2C3 310 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 FAM96BQ9Y3D0 163 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 E9PI62 339 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TRAPPC2LH3BP13 241 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 AMY2AP04746 511 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 GUSBP08236 651 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 SCCPDHQ8NBX0 429 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 THRSPQ92748 146 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ARL11Q969Q4 196 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 PIK3IP1Q96FE7 263 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 CNTNAP3BQ96NU0 1288 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 OXGR1Q96P68 337 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TSSK2Q96PF2 358 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 POTEKPQ9BYX7 375 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 WDR76Q9H967 626 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ISYNA1Q9NPH2 558 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RPS10P5Q9NQ39 176 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 C9orf172C9J069 976 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 MPIG6BO95866 241 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 OR2T7P0C7T2 308 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TBXA2RP21731 343 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 FGF9P31371 208 aaPredicted RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 PRSS3P35030 304 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 MLF1P58340 268 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RAC1P63000 192 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF574Q6ZN55 896 aaPredicted RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TMUB2Q71RG4 321 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 OR6V1Q8N148 313 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 BATF2Q8N1L9 274 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 STEAP2Q8NFT2 490 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 OR2T27Q8NH04 317 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 SEC22AQ96IW7 307 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 NRIP3Q9NQ35 241 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 CMC2Q9NRP2 79 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 PPIHO43447 177 aaKnown RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 NXPH2O95156 264 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RRASP10301 218 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ZP3P21754 424 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 GALNSP34059 522 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 SPOCK1Q08629 439 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 RIPPLY1Q0D2K3 151 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 EDDM3AQ14507 147 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 INPP5JQ15735 1006 aaPredicted RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TUSC1Q2TAM9 212 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 PRICKLE4Q2TBC4 344 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 SLC22A6Q4U2R8 563 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 CBLN3Q6UW01 205 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TSEN54Q7Z6J9 526 aaKnown RBP9.54□□□□□ -0.88
TCOF1-204ENST00000427724 ADGRG3Q86Y34 549 aa9.54□□□□□ -0.88
TCOF1-204ENST00000427724 TCTEX1D2Q8WW35 142 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms