RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 MKRN2OSH3BPM6 223 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SULT1B1O43704 296 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 LMX1BO60663 402 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 IGHV3-9P01782 118 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 ZNF20P17024 532 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 BDKRB2P30411 391 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 OR3A2P47893 321 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SLC6A9P48067 706 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SLC36A2Q495M3 483 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 DPPA2Q7Z7J5 298 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SPACA3Q8IXA5 215 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 KDF1Q8NAX2 398 aaPredicted RBP12.6□□□□□ -0.39
CDK3-201ENST00000425876 OR1M1Q8NGA1 313 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 OR51A2Q8NGJ7 313 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 OR14K1Q8NGZ2 314 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SYNPRQ8TBG9 265 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 C15orf40Q8WUR7 153 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SLC25A28Q96A46 364 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 FAM3DQ96BQ1 224 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 ABHD1Q96SE0 405 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 UQCC2Q9BRT2 126 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 RHBDL2Q9NX52 303 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 IGF2RP11717 2491 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 LOC100289279A0A1B0GTE1 492 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 DHRS7CA6NNS2 312 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 AHRRA9YTQ3 701 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 GSTZ1O43708 216 aaPredicted RBP12.6□□□□□ -0.39
CDK3-201ENST00000425876 ALX3O95076 343 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 DBHP09172 617 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 COX5BP10606 129 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 RAB3AP20336 220 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 HTR2CP28335 458 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 MPGP29372 298 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 GNALP38405 381 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 HTR5AP47898 357 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SPOCK1Q08629 439 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 FBXW9Q5XUX1 488 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 NAA40Q86UY6 237 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 COMMD2Q86X83 199 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
CDK3-201ENST00000425876 AKR7LQ8NHP1 331 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SLC7A6Q92536 515 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 WNT2BQ93097 391 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 SORCS2Q96PQ0 1159 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 N6AMT1Q9Y5N5 214 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 V9GYS6 101 aa12.6□□□□□ -0.39
CDK3-201ENST00000425876 ZZEF1O43149 2961 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 APC2O95996 2303 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 TMEM8BA6NDV4 472 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 E9PLN8 166 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 PLA2G10O15496 165 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 MTRF1O75570 445 aaKnown RBP12.59□□□□□ -0.39
CDK3-201ENST00000425876 DHRS3O75911 302 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 PDGFAP04085 211 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 ALDOBP05062 364 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 ANOS1P23352 680 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 POU3F4P49335 361 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 MRPS10P82664 201 aaKnown RBP12.59□□□□□ -0.39
CDK3-201ENST00000425876 FAPQ12884 760 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 MADCAM1Q13477 382 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 GUSBP1Q15486 140 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 GLYATL3Q5SZD4 288 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 OR51D1Q8NGF3 324 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 TRIM63Q969Q1 353 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 PTX4Q96A99 478 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 FAM71F1Q96KD3 344 aaPredicted RBP12.59□□□□□ -0.39
CDK3-201ENST00000425876 LYZL4Q96KX0 146 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
CDK3-201ENST00000425876 SLC22A4Q9H015 551 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 METTL17Q9H7H0 456 aaPredicted RBP12.59□□□□□ -0.39
CDK3-201ENST00000425876 ZNF224Q9NZL3 707 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 RAXQ9Y2V3 346 aa12.59□□□□□ -0.39
CDK3-201ENST00000425876 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.39
CDK3-201ENST00000425876 URB1O60287 2271 aaKnown RBP12.58□□□□□ -0.4
CDK3-201ENST00000425876 A6NIN4 97 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 K7ENP7 123 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 CRYABP02511 175 aaKnown RBP12.58□□□□□ -0.4
CDK3-201ENST00000425876 PATE4P0C8F1 98 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 THBS4P35443 961 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 ARR3P36575 388 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 RFX2P48378 723 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 BCAP31P51572 246 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 SF3B4Q15427 424 aaKnown RBP eCLIP12.58□□□□□ -0.45e-8■■■■□ 21.4
CDK3-201ENST00000425876 TAB1Q15750 504 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 C2orf76Q3KRA6 126 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 ANKRD16Q6P6B7 361 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 INO80CQ6PI98 192 aaPredicted RBP12.58□□□□□ -0.4
CDK3-201ENST00000425876 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
CDK3-201ENST00000425876 FAM214BQ7L5A3 538 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 SOX7Q9BT81 388 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 RGCCQ9H4X1 137 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 PLEKHA1Q9HB21 404 aa12.58□□□□□ -0.4
CDK3-201ENST00000425876 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms