RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 UBL3O95164 117 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 IL18BPO95998 194 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 HTR5AP47898 357 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 HGFACQ04756 655 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 TBR1Q16650 682 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 ACSF3Q4G176 576 aaPredicted RBP13.27□□□□□ -0.29
ACTB-204ENST00000425660 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 BAIAP2L2Q6UXY1 529 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 POC5Q8NA72 575 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 OR14K1Q8NGZ2 314 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 RAB40AQ8WXH6 277 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 SLC25A28Q96A46 364 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 FOXRED1Q96CU9 486 aaPredicted RBP13.27□□□□□ -0.29
ACTB-204ENST00000425660 GPR137Q96N19 417 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 C12orf49Q9H741 205 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 TMEM138Q9NPI0 162 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 RABL2AQ9UBK7 228 aaPredicted RBP13.27□□□□□ -0.29
ACTB-204ENST00000425660 RABL2BQ9UNT1 228 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 RHBDD3Q9Y3P4 386 aa13.27□□□□□ -0.29
ACTB-204ENST00000425660 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 FREM1Q5H8C1 2179 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 DHRS3O75911 302 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 CNOT4O95628 575 aaKnown RBP13.26□□□□□ -0.29
ACTB-204ENST00000425660 OCMP0CE72 109 aaPredicted RBP13.26□□□□□ -0.29
ACTB-204ENST00000425660 COX5BP10606 129 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 SCN1BQ07699 218 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 SNAI3Q3KNW1 292 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 PABPC1L2AQ5JQF8 200 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 C1orf100Q5SVJ3 147 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 SFRP5Q5T4F7 317 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 NSUN5P2Q63ZY6 315 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 DPPA2Q7Z7J5 298 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 CMTM4Q8IZR5 234 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 OR6M1Q8NGM8 313 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 SNRNP27Q8WVK2 155 aaKnown RBP13.26□□□□□ -0.29
ACTB-204ENST00000425660 C10orf35Q96D05 121 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 ABHD1Q96SE0 405 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 OR10A2Q9H208 303 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 ZNF391Q9UJN7 358 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 N6AMT1Q9Y5N5 214 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 V9GYS6 101 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 CACNA1GO43497 2377 aa13.26□□□□□ -0.29
ACTB-204ENST00000425660 A0A096LPE4 126 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ZNHIT1O43257 154 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 BDKRB2P30411 391 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 UCNP55089 124 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 C9orf135Q5VTT2 229 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 OR2A2Q6IF42 318 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ANKRD16Q6P6B7 361 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 TFAP2EQ6VUC0 442 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 CPEB3Q8NE35 698 aaKnown RBP13.25□□□□□ -0.29
ACTB-204ENST00000425660 OR1M1Q8NGA1 313 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 HAVCR1Q96D42 359 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 FAM71F1Q96KD3 344 aaPredicted RBP13.25□□□□□ -0.29
ACTB-204ENST00000425660 IGF2RP11717 2491 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 CHD8Q9HCK8 2581 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ZNF503-AS2A6NEH8 195 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 A6NIN4 97 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 SULT1B1O43704 296 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 TPPPO94811 219 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ABOP16442 354 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ZNF20P17024 532 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 RAB3AP20336 220 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 HTR2CP28335 458 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 GNALP38405 381 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 SPOCK1Q08629 439 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 MADCAM1Q13477 382 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ASAH1Q13510 395 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 RAB11BQ15907 218 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 KRTCAP3Q53RY4 240 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 GLYATL3Q5SZD4 288 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 ZNF324BQ6AW86 544 aaPredicted RBP13.25□□□□□ -0.29
ACTB-204ENST00000425660 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 CDH26Q8IXH8 852 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 C9orf106Q8NAJ2 232 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 OR1K1Q8NGR3 316 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 FAM3DQ96BQ1 224 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 SGK3Q96BR1 496 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 UQCC2Q9BRT2 126 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 RGCCQ9H4X1 137 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 METTL17Q9H7H0 456 aaPredicted RBP13.25□□□□□ -0.29
ACTB-204ENST00000425660 TP53TG5Q9Y2B4 290 aa13.25□□□□□ -0.29
ACTB-204ENST00000425660 LOC100289279A0A1B0GTE1 492 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 CTDSPLO15194 276 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 MTRF1O75570 445 aaKnown RBP13.24□□□□□ -0.29
ACTB-204ENST00000425660 ALX3O95076 343 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 HLA-HP01893 362 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 ERCC1P07992 297 aaPredicted RBP13.24□□□□□ -0.29
ACTB-204ENST00000425660 ARR3P36575 388 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 MNDAP41218 407 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 KIR2DL2P43627 348 aaPredicted RBP13.24□□□□□ -0.29
ACTB-204ENST00000425660 MMP15P51511 669 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 ART1P52961 327 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 TMPRSS3P57727 454 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 PITPNAQ00169 270 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms