RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DMKNQ6E0U4 476 aaPredicted RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 CLVS1Q8IUQ0 354 aaPredicted RBP11.61□□□□□ -0.55
PRPF39-202ENST00000424478 OR13F1Q8NGS4 319 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 OR14A2Q96R54 314 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 COQ7Q99807 217 aa11.61□□□□□ -0.55
PRPF39-202ENST00000424478 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 FABP5Q01469 135 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 NAAAQ02083 359 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 ALKBH6Q3KRA9 238 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 FBXL19-AS1Q494R0 122 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 TMEM255AQ5JRV8 349 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 OR5AK2Q8NH90 309 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 DVL3Q92997 716 aaPredicted RBP11.6□□□□□ -0.55
PRPF39-202ENST00000424478 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 IGHV3-64DA0A0J9YX35 117 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.6□□□□□ -0.55
PRPF39-202ENST00000424478 J3QKU1 62 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 LILRA1O75019 489 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 CD40P25942 277 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
PRPF39-202ENST00000424478 HIST2H2BCQ6DN03 193 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 GPR141Q7Z602 305 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 SGK3Q96BR1 496 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 OR2J1Q9GZK6 312 aa11.6□□□□□ -0.55
PRPF39-202ENST00000424478 LOC107986453A0A1B0GWG9 222 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF254O75437 659 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 CPEP16870 476 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 MMP16P51512 607 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 RPS11P62280 158 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF39-202ENST00000424478 FOXB2Q5VYV0 432 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 OR5AS1Q8N127 324 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 CENPOQ9BU64 300 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
PRPF39-202ENST00000424478 PRSS44E7EML9 344 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 CCRL2O00421 344 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 MRPS14O60783 128 aaKnown RBP11.59□□□□□ -0.55
PRPF39-202ENST00000424478 GPX5O75715 221 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 ZNF35P13682 527 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-202ENST00000424478 FABP6P51161 128 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 KRTAP27-1Q3LI81 207 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 RPL22L1Q6P5R6 122 aaKnown RBP11.59□□□□□ -0.55
PRPF39-202ENST00000424478 DEGS2Q6QHC5 323 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 SLC22A25Q6T423 547 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 OR1J1Q8NGS3 322 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 OGG1O15527 345 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 SMPD2O60906 423 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 CLDN1O95832 211 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 LRP11Q86VZ4 500 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 KBTBD8Q8NFY9 601 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 FCGR1BQ92637 280 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 PIK3IP1Q96FE7 263 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 NDRG3Q9UGV2 375 aa11.59□□□□□ -0.55
PRPF39-202ENST00000424478 ACKR3P25106 362 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 MPV17P39210 176 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 VBP1P61758 197 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 NCS1P62166 190 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 SNTB2Q13425 540 aaKnown RBP11.58□□□□□ -0.56
PRPF39-202ENST00000424478 TPBGQ13641 420 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 C22orf42Q6IC83 251 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 DRAM2Q6UX65 266 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 TMEM91Q6ZNR0 172 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 YIPF6Q96EC8 236 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 MRPL48Q96GC5 212 aaKnown RBP11.58□□□□□ -0.56
PRPF39-202ENST00000424478 REEP6Q96HR9 211 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 A0A1B0GTI1 187 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 PLPP2O43688 288 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 ATE1O95260 518 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 ECH1Q13011 328 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 GK2Q14410 553 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-202ENST00000424478 CCDC36Q8IYA8 594 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 ELMOD2Q8IZ81 293 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 SLC25A40Q8TBP6 338 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 TSEN15Q8WW01 171 aaKnown RBP11.58□□□□□ -0.56
PRPF39-202ENST00000424478 NIPAL2Q9H841 368 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 NDUFB11Q9NX14 153 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 NUFIP1Q9UHK0 495 aaKnown RBP11.58□□□□□ -0.56
PRPF39-202ENST00000424478 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
PRPF39-202ENST00000424478 CRYAAP02489 173 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 KIR2DL3P43628 341 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 UCP2P55851 309 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 TNK1Q13470 666 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 SLC16A12Q6ZSM3 486 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 P2RY8Q86VZ1 359 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 SSC4DQ8WTU2 575 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 NPRL2Q8WTW4 380 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 BOD1Q96IK1 185 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 POU2F3Q9UKI9 436 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 SHISA3A0PJX4 238 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 OCM2P0CE71 109 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-202ENST00000424478 FAHP16930 419 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 CRYBB2P43320 205 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 TGM4P49221 684 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 OR2T2Q6IF00 324 aa11.57□□□□□ -0.56
PRPF39-202ENST00000424478 RNF144BQ7Z419 303 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms