RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 CCDC71LQ8N9Z2 235 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SRFBP1Q8NEF9 429 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RAB1CQ92928 201 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 NEIL1Q96FI4 390 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 CEP19Q96LK0 163 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 LINC01600Q96MT4 127 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 TRNT1Q96Q11 434 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 TMEM237Q96Q45 408 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 OR7D2Q96RA2 312 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 FOXB1Q99853 325 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SH3GL1Q99961 368 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 OR51B5Q9H339 312 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 GNB4Q9HAV0 340 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 INTS9Q9NV88 658 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ATAD3AQ9NVI7 634 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ERVK13-1Q9NX77 482 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ANGPTL3Q9Y5C1 460 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 FSIP2Q5CZC0 6907 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 TEX13CA0A0J9YWL9 993 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 CGB1A6NKQ9 187 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 H3BNX3 289 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 KPNA4O00629 521 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 DNALI1O14645 258 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RAD51CO43502 376 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 EIF1BO60739 113 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 VAMP5O95183 116 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 CST4P01036 141 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SNRNP70P08621 437 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 IL3P08700 152 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SNRPAP09012 282 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RAC2P15153 192 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 AKT1P31749 480 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 STX2P32856 288 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 HSD17B3P37058 310 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RPS6KA3P51812 740 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 POLR2HP52434 150 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 PRKAA2P54646 552 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RAB25P57735 213 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ARPC4P59998 168 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 RPS3AP61247 264 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ATP6V0D1P61421 351 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 NAB1Q13506 487 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 DDX39BQ13838 428 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ZNF267Q14586 743 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 Q3ZCU0 254 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 C4orf46Q504U0 113 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MINOS1Q5TGZ0 78 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 CGB2Q6NT52 195 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 KCTD18Q6PI47 426 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 CYP2R1Q6VVX0 501 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 LINC00299Q6ZSB3 139 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MAVSQ7Z434 540 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 TMPRSS11BQ86T26 416 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MAP7D3Q8IWC1 876 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 BOLLQ8N9W6 283 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 NOA1Q8NC60 698 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 ST7LQ8TDW4 575 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MALSU1Q96EH3 234 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 DCUN1D1Q96GG9 259 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 UBE2E2Q96LR5 201 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 YTHDF1Q9BYJ9 559 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SEMA6AQ9H2E6 1030 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 OR51I2Q9H344 312 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 PLGRKTQ9HBL7 147 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 GID8Q9NWU2 228 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 COPS7AQ9UBW8 275 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MCTS1Q9ULC4 181 aaKnown RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 PYCARDQ9ULZ3 195 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 SH3GLB1Q9Y371 365 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 UBE2J1Q9Y385 318 aaPredicted RBP1.23□□□□□ -2.21
UBE2W-202ENST00000422906 MINOS1-NBL1R4GNA1 71 aa1.23□□□□□ -2.21
UBE2W-202ENST00000422906 NPIPA5A0A0B4J1W7 369 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 IZUMO1RA6ND01 250 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 SAC3D1A6NKF1 404 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 EVPLLA8MZ36 301 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 FAM25AB3EWG3 89 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 FAM25CB3EWG5 89 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 FAM25GB3EWG6 89 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 NPIPA7E9PJI5 369 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 M0R233 179 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 ZNF264O43296 627 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 TBX1O43435 398 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 COQ9O75208 318 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 PEX14O75381 377 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 SPAG7O75391 227 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 KLHL2O95198 593 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 KRT75O95678 551 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 IGLV2-23P01705 113 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 APOA1P02647 267 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 NPIPA8P0DM63 369 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 LINC00694P0DN24 101 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 PCNAP12004 261 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 SPNP16150 400 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 CEBPDP49716 269 aaPredicted RBP1.22□□□□□ -2.21
UBE2W-202ENST00000422906 CCNG1P51959 295 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 STX1BP61266 288 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 NAA20P61599 178 aa1.22□□□□□ -2.21
UBE2W-202ENST00000422906 ARF1P84077 181 aaKnown RBP1.22□□□□□ -2.21
UBE2W-202ENST00000422906 ID2Q02363 134 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms