RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CMAHPQ9Y471 501 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 FAM215AQ9Y5M1 114 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 N6AMT1Q9Y5N5 214 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 ESPL1Q14674 2120 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 HEATR1Q9H583 2144 aaKnown RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 PRRC2CQ9Y520 2896 aaKnown RBP5.21□□□□□ -1.58
HMGB3-202ENST00000419110 ASPMQ8IZT6 3477 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.58
HMGB3-202ENST00000419110 ACACBO00763 2458 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CHD3Q12873 2000 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 DHRS7CA6NNS2 312 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 H3BSH0 61 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 J3QW42 95 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 AIPO00170 330 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 DVL2O14641 736 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ZNHIT1O43257 154 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 MTRF1O75570 445 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 TNFSF13O75888 250 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 DHRS3O75911 302 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 LYZL6O75951 148 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 NCR1O76036 304 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 HLA-HP01893 362 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 LCATP04180 440 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 SERPINA5P05154 406 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CLEC2LP0C7M8 214 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CCL1P22362 96 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 IGHV1-2P23083 117 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CTSSP25774 331 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 THBS4P35443 961 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 TALDO1P37837 337 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 RPS19P39019 145 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 KIR2DL2P43627 348 aaPredicted RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PSMD7P51665 324 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CAPZA1P52907 286 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PSG4Q00888 419 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 MALLQ13021 153 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 MRPL49Q13405 166 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 P2RY6Q15077 328 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 MOGQ16653 247 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 HIKESHIQ53FT3 197 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 IDNKQ5T6J7 187 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 GLT8D1Q68CQ7 371 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 RTL6Q6ICC9 239 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 BAIAP2L2Q6UXY1 529 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PGAP1Q75T13 922 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 BHLHA15Q7RTS1 189 aaPredicted RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 MRPL21Q7Z2W9 205 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 LAX1Q8IWV1 398 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 FTMTQ8N4E7 242 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF433Q8N7K0 673 aaPredicted RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ST6GALNAC3Q8NDV1 305 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 OR51A4Q8NGJ6 313 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 OR1J2Q8NGS2 313 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 OR10AC1Q8NH08 325 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 TRMT10AQ8TBZ6 339 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 OR51E1Q8TCB6 317 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 LGALS14Q8TCE9 139 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 BORCS5Q969J3 196 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 SNRNP40Q96DI7 357 aaKnown RBP5.2□□□□□ -1.58
HMGB3-202ENST00000419110 REEP6Q96HR9 211 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 WDFY2Q96P53 400 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 SPOCK3Q9BQ16 436 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PLGRKTQ9HBL7 147 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 CDH20Q9HBT6 801 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PALMDQ9NP74 551 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 AKIP1Q9NQ31 210 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ASF1BQ9NVP2 202 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 TAS2R4Q9NYW5 299 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ABRACLQ9P1F3 81 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 DAPK2Q9UIK4 370 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 TINAGQ9UJW2 476 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 FOXJ3Q9UPW0 622 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 ETV7Q9Y603 341 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 PMF1-BGLAPU3KQ54 211 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 DMXL2Q8TDJ6 3036 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 COL6A6A6NMZ7 2263 aa5.2□□□□□ -1.58
HMGB3-202ENST00000419110 A0A0G2JK05 382 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 A0A1W2PPK0 400 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SHISA3A0PJX4 238 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 C5orf49A4QMS7 147 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MEGF11A6BM72 1044 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 FAM25AB3EWG3 89 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 FAM25CB3EWG5 89 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 FAM25GB3EWG6 89 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MAGEB3O15480 346 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SULT1B1O43704 296 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 MAS1P04201 325 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 HCKP08631 526 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 DBHP09172 617 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 PATE4P0C8F1 98 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 GLI4P10075 376 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 BMP4P12644 408 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 SRMP19623 302 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 RAB3AP20336 220 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CCNOP22674 350 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 STOMP27105 288 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 APEX1P27695 318 aaKnown RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 BDKRB2P30411 391 aa5.19□□□□□ -1.58
HMGB3-202ENST00000419110 CEACAM8P31997 349 aaPredicted RBP5.19□□□□□ -1.58
HMGB3-202ENST00000419110 IDH3GP51553 393 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms