RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CACNG6Q9BXT2 260 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ABCG4Q9H172 646 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C11orf49Q9H6J7 331 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MTHFD2LQ9H903 347 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 PLEKHA1Q9HB21 404 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BCL2L10Q9HD36 194 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RAB9BQ9NP90 201 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 IFT46Q9NQC8 304 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MIEF1Q9NQG6 463 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NANSQ9NR45 359 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NUDT15Q9NV35 164 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 C14orf105Q9NVL8 296 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SDHAF2Q9NX18 166 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 BABAM2Q9NXR7 383 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 KLHL28Q9NXS3 571 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 SLCO1C1Q9NYB5 712 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NLGN3Q9NZ94 848 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 MED11Q9P086 117 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 STOX2Q9P2F5 926 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 MBD2Q9UBB5 411 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 RPS6KB2Q9UBS0 482 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ZMAT5Q9UDW3 170 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 SEC14L3Q9UDX4 400 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FBXL3Q9UKT7 428 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 FBXW2Q9UKT8 454 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 ENTPD4Q9Y227 616 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 NSG2Q9Y328 171 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 WIPI2Q9Y4P8 454 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 OR51B4Q9Y5P0 310 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 KLF2Q9Y5W3 355 aaPredicted RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 CCDC88CQ9P219 2028 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 CENPFP49454 3210 aa2.23□□□□□ -2.05
VPS41-206ENST00000418457 HELZP42694 1942 aaKnown RBP2.23□□□□□ -2.05
VPS41-206ENST00000418457 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 TRAV6A0A075B6T7 132 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 A0A087WZ39 114 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 A0A0D9SG52 128 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 A0A1B0GU03 582 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 DAPL1A0PJW8 107 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PQLC2LA1A4F0 135 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MEX3AA1L020 520 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF840PA6NDX5 716 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TRABD2BA6NFA1 517 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OOEPA6NGQ2 149 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF879B4DU55 563 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ANHXE9PGG2 379 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TEX46H3BTG2 121 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 GABARAPH6UMI1 98 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 H7C2Y5 167 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF593O00488 134 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 ST8SIA3O43173 380 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 EEF1E1O43324 174 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 COCHO43405 550 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PI15O43692 258 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CREBL2O60519 120 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 GMDSO60547 372 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 RAD1O60671 282 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TBL1XO60907 577 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SDC3O75056 442 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 DNAJB6O75190 326 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 DUSP11O75319 330 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 SAP30O75446 220 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CEACAM4O75871 244 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR2A4O95047 310 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR5F1O95221 314 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 MPC2O95563 127 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 POP4O95707 220 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 CD160O95971 181 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 APOC1P02654 83 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 RPN2P04844 631 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 IFNA4P05014 189 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 EIF4EP06730 217 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR4Q2P0C623 313 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SP9P0CG40 484 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 UBBP0CG47 229 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 UBCP0CG48 685 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 ALPPL2P10696 532 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ZNF250P15622 560 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CELP19835 753 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 RAB3BP20337 219 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PSMB1P20618 241 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 NFYAP23511 347 aaPredicted RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 MMP11P24347 488 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 GIFP27352 417 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 IMPA1P29218 277 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 AGTR1P30556 359 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 NTSP30990 170 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 CD52P31358 61 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 S100A11P31949 105 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 ATP6V1E1P36543 226 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 FEN1P39748 380 aaKnown RBP2.22□□□□□ -2.05
VPS41-206ENST00000418457 CSKP41240 450 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 OR1G1P47890 313 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 NPBWR1P48145 328 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 SPINT3P49223 89 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 PRLHRP49683 370 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TMEM50BP56557 158 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TAS2R41P59536 307 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 BPIFB3P59826 476 aa2.22□□□□□ -2.05
VPS41-206ENST00000418457 TBPL1P62380 186 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms