RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 C11orf54Q9H0W9 315 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-205ENST00000414879 C20orf85Q9H1P6 137 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 CHST2Q9Y4C5 530 aa10.74□□□□□ -0.69
PTPRF-205ENST00000414879 IGHV3-9P01782 118 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 HOXB3P14651 431 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 B4GALT1P15291 398 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 RAB6AP20340 208 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 GNG3P63215 75 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 FXNQ16595 210 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 AADACL4Q5VUY2 407 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 HAGHLQ6PII5 290 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 CORO6Q6QEF8 472 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SAP25Q8TEE9 199 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 LRP12Q9Y561 859 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 MIA3Q5JRA6 1907 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 XRCC3O43542 346 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 HOXB5P09067 269 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 EPXP11678 715 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 HOXA6P31267 233 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 MLF1P58340 268 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 PLA2G7Q13093 441 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 CDONQ4KMG0 1287 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 Q6ZNX1 250 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SPRED2Q7Z698 418 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 TMEM200AQ86VY9 491 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SLC22A18ASQ8N1D0 253 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 CLDN23Q96B33 292 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 ACKR4Q9NPB9 350 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 FAM212BQ9NTI7 297 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 A6NIN4 97 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 CASP3P42574 277 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 RAB1AP62820 205 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 DHODHQ02127 395 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 C2orf76Q3KRA6 126 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 ESCO2Q56NI9 601 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SLC22A25Q6T423 547 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 MRGPREQ86SM8 312 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 C4orf45Q96LM5 186 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SLC22A13Q9Y226 551 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 ZC3H12DA2A288 527 aaKnown RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 LIPT2A6NK58 231 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SNRPGP15A8MWD9 76 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 EFEMP2O95967 443 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 GLRA1P23415 457 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 THBS3P49746 956 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 SKP2Q13309 424 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 PLA1AQ53H76 456 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 NANPQ8TBE9 248 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 MRPS24Q96EL2 167 aaKnown RBP10.73□□□□□ -0.69
PTPRF-205ENST00000414879 GNRHR2Q96P88 292 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 FN3KRPQ9HA64 309 aa10.73□□□□□ -0.69
PTPRF-205ENST00000414879 A0A1W2PPV4 95 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 A0A1W2PR77 199 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 A0A1W2PS29 197 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 FITM1A5D6W6 292 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 DHRS3O75911 302 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 EPPINO95925 133 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 LUMP51884 338 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 SUB1P53999 127 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 EDDM3BP56851 147 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 SRSF5Q13243 272 aaKnown RBP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 SLC9A3R2Q15599 337 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 GPR157Q5UAW9 335 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 OSR2Q8N2R0 312 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 ARRDC1Q8N5I2 433 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 OR10R2Q8NGX6 335 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 OR2W5A6NFC9 320 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 ARF1P84077 181 aaKnown RBP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 TSPAN32Q96QS1 320 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 DOK1Q99704 481 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 M0R1B8 84 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 GIPP09681 153 aaPredicted RBP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 TRILQ7L0X0 811 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 FJX1Q86VR8 437 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 GABRG1Q8N1C3 465 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 OR2M5A3KFT3 312 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 OR5B21A6NL26 309 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 A8MXE2 369 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 MMP15P51511 669 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 UBE2MP61081 183 aaKnown RBP10.72□□□□□ -0.69
PTPRF-205ENST00000414879 CDC20Q12834 499 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 LCN10Q6JVE6 187 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 WDFY2Q96P53 400 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 S1PR3Q99500 378 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 MFRPQ9BY79 579 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 C20orf141Q9NUB4 165 aa10.72□□□□□ -0.69
PTPRF-205ENST00000414879 TAAR5O14804 337 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 TSPAN4O14817 238 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 IFNA4P05014 189 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CT45A8P0DMV1 189 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CT45A9P0DMV2 189 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CCL4P13236 92 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 INSM1Q01101 510 aaPredicted RBP10.71□□□□□ -0.69
PTPRF-205ENST00000414879 ZP4Q12836 540 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 GAB4Q2WGN9 574 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 CT45A2Q5DJT8 189 aa10.71□□□□□ -0.69
PTPRF-205ENST00000414879 DCAF10Q5QP82 559 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms