RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MARC2Q969Z3 335 aa14.82□□□□□ -0.04
LIMS2-208ENST00000410011 MRGPRX4Q96LA9 322 aa14.82□□□□□ -0.04
LIMS2-208ENST00000410011 SELENOIQ9C0D9 397 aa14.82□□□□□ -0.04
LIMS2-208ENST00000410011 B3GAT1Q9P2W7 334 aa14.82□□□□□ -0.04
LIMS2-208ENST00000410011 SHPKQ9UHJ6 478 aa14.82□□□□□ -0.04
LIMS2-208ENST00000410011 IGLV3-32A0A0A0MS00 114 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 PIAS2O75928 621 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 TSPAN9O75954 239 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 GNB3P16520 340 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 AVPR2P30518 371 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 BIDP55957 195 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 FBXW4P57775 412 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 FOXK1P85037 733 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 EIF3IQ13347 325 aaKnown RBP14.81□□□□□ -0.04
LIMS2-208ENST00000410011 COL19A1Q14993 1142 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 HYAL4Q2M3T9 481 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 TMEM128Q5BJH2 165 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 C1orf189Q5VU69 101 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 COX15Q7KZN9 410 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 TERB2Q8NHR7 220 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 C5orf34Q96MH7 638 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF75AQ96N20 296 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 LPAR5Q9H1C0 372 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 TEX13DA0A0J9YY54 714 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF878C9JN71 531 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 GLB1P16278 677 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 LRRC37A5PQ49AS3 106 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 AWAT2Q6E213 333 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 WDR74Q6RFH5 385 aaPredicted RBP14.81□□□□□ -0.04
LIMS2-208ENST00000410011 ATRAIDQ6UW56 229 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 OR5AP2Q8NGF4 316 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 KCNG3Q8TAE7 436 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 SLC6A15Q9H2J7 730 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 FN3KRPQ9HA64 309 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 SLC22A11Q9NSA0 550 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 FGF21Q9NSA1 209 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 SRPK3Q9UPE1 567 aa14.81□□□□□ -0.04
LIMS2-208ENST00000410011 NUDT19A8MXV4 375 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 ATP6V1G2-DDX39BF2Z307 99 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 CCL1P22362 96 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 EMP2P54851 167 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 FOXF1Q12946 379 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 RHBDD2Q6NTF9 364 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 NAA40Q86UY6 237 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 DEFB119Q8N690 84 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 ADAD2Q8NCV1 583 aaKnown RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 BPIFCQ8NFQ6 507 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 OR4K15Q8NH41 348 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 STT3BQ8TCJ2 826 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 PIK3IP1Q96FE7 263 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 LRRC46Q96FV0 321 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 C1orf147Q96MC9 270 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 CHMP1AQ9HD42 196 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 TMEM100Q9NV29 134 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 HRH3Q9Y5N1 445 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 F5H0A9 414 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF354AO60765 605 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 IL32P24001 234 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF169Q14929 603 aaPredicted RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 KCNMB1Q16558 191 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 SLC22A6Q4U2R8 563 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 SLC30A7Q8NEW0 376 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 OR13C9Q8NGT0 318 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 SCGB3A2Q96PL1 93 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 OCSTAMPQ9BR26 566 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF768Q9H5H4 540 aaKnown RBP14.8□□□□□ -0.04
LIMS2-208ENST00000410011 MBD2Q9UBB5 411 aa14.8□□□□□ -0.04
LIMS2-208ENST00000410011 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
LIMS2-208ENST00000410011 LIPCP11150 499 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 LYL1P12980 280 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF20P17024 532 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 CBX5P45973 191 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 LBX1P52954 281 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 ZNF239Q16600 458 aaKnown RBP14.79□□□□□ -0.04
LIMS2-208ENST00000410011 NSUN5P2Q63ZY6 315 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 ELP2Q6IA86 826 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 ANKRD37Q7Z713 158 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 OR5AS1Q8N127 324 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 OR4K17Q8NGC6 315 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 FOXQ1Q9C009 403 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 SDHAF3Q9NRP4 125 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 LHFPL6Q9Y693 200 aa14.79□□□□□ -0.04
LIMS2-208ENST00000410011 EFNA2O43921 213 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 PGA4P0DJD7 388 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 PGA3P0DJD8 388 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 AKR1C4P17516 323 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 VAMP1P23763 118 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 MC2RQ01718 297 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 PABPC1L2AQ5JQF8 200 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 RABEPKQ7Z6M1 372 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 CLRN3Q8NCR9 226 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 SSC4DQ8WTU2 575 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 RAB18Q9NP72 206 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS2-208ENST00000410011 VDAC3Q9Y277 283 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 GON4LQ3T8J9 2241 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 EXPH5Q8NEV8 1989 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 FAM25EA8MYX2 175 aa14.78□□□□□ -0.04
LIMS2-208ENST00000410011 TOX3O15405 576 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms