RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 RNF4P78317 190 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 RNF144BQ7Z419 303 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 DEFB123Q8N688 67 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 THAP3Q8WTV1 239 aaPredicted RBP13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 C5orf34Q96MH7 638 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 PBOV1Q9GZY1 135 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 ZNF768Q9H5H4 540 aaKnown RBP13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 TAS2R3Q9NYW6 316 aa13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 ATXN7L1Q9ULK2 861 aaPredicted RBP13.49□□□□□ -0.25
LYSMD4-204ENST00000409796 IGHV1OR21-1A0A087WYE8 117 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SULT2B1O00204 365 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SYT7O43581 403 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 MEOX2P50222 304 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 MC2RQ01718 297 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 KCTD9Q7L273 389 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SYT13Q7L8C5 426 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SLC22A24Q8N4F4 322 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SMRP1Q8NCR6 262 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 OR10H5Q8NGA6 315 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 OR13C9Q8NGT0 318 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 OR6S1Q8NH40 331 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SELENOIQ9C0D9 397 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 NDRG3Q9UGV2 375 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 MLXQ9UH92 298 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 LAMA1P25391 3075 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 ZNF217O75362 1048 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 BPNT1O95861 308 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 ERCC1P07992 297 aaPredicted RBP13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 AKR1C4P17516 323 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 CNR1P21554 472 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 VAMP1P23763 118 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 CASRP41180 1078 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 RAB30Q15771 203 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 KLHL24Q6TFL4 600 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 D2HGDHQ8N465 521 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 BPIFCQ8NFQ6 507 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 ST8SIA1Q92185 356 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 PHB2Q99623 299 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 SLC5A6Q9Y289 635 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 ABCA7Q8IZY2 2146 aa13.48□□□□□ -0.25
LYSMD4-204ENST00000409796 A0A1B0GX78 115 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 METTL12A8MUP2 240 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 EEF1E1-BLOC1S5C9J1V9 151 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 EFSO43281 561 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 KCNAB3O43448 404 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 SSX5O60225 188 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PRKXP51817 358 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 BIDP55957 195 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 CLDN6P56747 220 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PPIAP62937 165 aaKnown RBP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 FOXF1Q12946 379 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 MISPQ8IVT2 679 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 GAREM1Q9H706 876 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 MBD2Q9UBB5 411 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 H3BML4 177 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 APOC1P02654 83 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PMP2P02689 132 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 GP1BAP07359 652 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 SNTB1Q13884 538 aaKnown RBP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 BOLLQ8N9W6 283 aaKnown RBP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 TMEM185AQ8NFB2 350 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 OR2I1PQ8NGU4 316 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 THAP6Q8TBB0 222 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 NICN1Q9BSH3 213 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 SPEGQ15772 3267 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 RALGAPA1Q6GYQ0 2036 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 LINC00587B1AMM8 73 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 MYF5P13349 255 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 APOBEC1P41238 236 aaKnown RBP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 RAB13P51153 203 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 HNRNPKP61978 463 aaKnown RBP eCLIP13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 C17orf67Q0P5P2 114 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 AWAT2Q6E213 333 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PLPP5Q8NEB5 264 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 OR10R2Q8NGX6 335 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 PHYHIPLQ96FC7 376 aa13.47□□□□□ -0.25
LYSMD4-204ENST00000409796 NPIPB13A6NJU9 1138 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 NPIPB4C9JG80 1138 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 F5H0A9 414 aaPredicted RBP13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 IFNA6P05013 189 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 GLAP06280 429 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 TMEM88Q6PEY1 159 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 COX15Q7KZN9 410 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 TMEM17Q86X19 198 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 DTWD2Q8NBA8 298 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 MARCH1Q8TCQ1 289 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 SLC22A11Q9NSA0 550 aa13.46□□□□□ -0.25
LYSMD4-204ENST00000409796 PQLC2LA1A4F0 135 aa13.46□□□□□ -0.26
LYSMD4-204ENST00000409796 LIPT2A6NK58 231 aa13.46□□□□□ -0.26
LYSMD4-204ENST00000409796 TMEM14DPA8MWL7 114 aa13.46□□□□□ -0.26
LYSMD4-204ENST00000409796 INPP5JQ15735 1006 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms