RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 OR9K2Q8NGE7 335 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 NTNG2Q96CW9 530 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 CCNL2Q96S94 520 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 SLC6A7Q99884 636 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 AIF1LQ9BQI0 150 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 PDE7BQ9NP56 450 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 KCNJ16Q9NPI9 418 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 PITPNC1Q9UKF7 332 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 SH2B3Q9UQQ2 575 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 KCNK6Q9Y257 313 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 GOLT1BQ9Y3E0 138 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 FBXO7Q9Y3I1 522 aa9.52□□□□□ -0.89
NIF3L1-204ENST00000409357 METTL12A8MUP2 240 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 B4DEV8 164 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 M0R143 59 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DCTN6O00399 190 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 CCSO14618 274 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 BNIP3LO60238 219 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 UPK3AO75631 287 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SEMA4FO95754 770 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 IGHV4-34P06331 123 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 RAB6AP20340 208 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DRD3P35462 400 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SERPINF1P36955 418 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 KIR3DL2P43630 455 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ZNF84P51523 738 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 NANOS3P60323 173 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SNRPD1P62314 119 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 LASP1Q14847 261 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ARHGAP19Q14CB8 494 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 USF2Q15853 346 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 RAB11BQ15907 218 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 C2orf76Q3KRA6 126 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 C14orf28Q4W4Y0 310 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ZNF385CQ66K41 422 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 Q6ZRG5 221 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 RFLNBQ8N5W9 214 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 CADM4Q8NFZ8 388 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DNASE2BQ8WZ79 361 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 KLK6Q92876 244 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ZNF587Q96SQ5 575 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DDA1Q9BW61 102 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ZNF350Q9GZX5 532 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 PCBD2Q9H0N5 130 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 LAMP5Q9UJQ1 280 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 V9GYS6 101 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 NUP210LQ5VU65 1888 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 A0A1W2PPE2 198 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 OR4C45A6NMZ5 311 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 LDLRAD4O15165 306 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 TMPRSS11DO60235 418 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SOD3P08294 240 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 OR8U9P0C7N5 309 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DANCRP0C864 163 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 CLUP10909 449 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ERGP11308 486 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 CHATP28329 748 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 THBS4P35443 961 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 AKR1C3P42330 323 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 NCBP2P52298 156 aaKnown RBP eCLIP9.51□□□□□ -0.893e-10■■□□□ 11.4
NIF3L1-204ENST00000409357 SLC25A1P53007 311 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 HSD17B7P56937 341 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 BPIFB3P59826 476 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 POLR2LP62875 67 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SKP1P63208 163 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 REEP5Q00765 189 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 RASGEF1BQ0VAM2 473 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ELAVL3Q14576 367 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ARHGAP11BQ3KRB8 267 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 PRAMEF14Q5SWL7 426 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ABLIM2Q6H8Q1 611 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 MED25Q71SY5 747 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 AVL9Q8NBF6 648 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 OR8U1Q8NH10 309 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 DVL3Q92997 716 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 KTI12Q96EK9 354 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 MVB12AQ96EY5 273 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ADGRG7Q96K78 797 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 C2orf50Q96LR7 162 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 TGM7Q96PF1 710 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ZNF385AQ96PM9 386 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 RAB33BQ9H082 229 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 FBRSQ9HAH7 460 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SLC23A2Q9UGH3 650 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 SLC25A13Q9UJS0 675 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 OR52A1Q9UKL2 312 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 HS3ST2Q9Y278 367 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 MMACHCQ9Y4U1 282 aa9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
NIF3L1-204ENST00000409357 CHD6Q8TD26 2715 aa9.5□□□□□ -0.89
NIF3L1-204ENST00000409357 CACNA1BQ00975 2339 aa9.5□□□□□ -0.89
NIF3L1-204ENST00000409357 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
NIF3L1-204ENST00000409357 C5orf51A6NDU8 294 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms