RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 COLCA1Q6ZS62 124 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 ZNF826PQ6ZT77 177 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 CMTM4Q8IZR5 234 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 DPP10Q8N608 796 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 GJC3Q8NFK1 279 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 SYT4Q9H2B2 425 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 NDUFAF1Q9Y375 327 aa13.65□□□□□ -0.22
CHMP3-203ENST00000409225 COL7A1Q02388 2944 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 hCG_1807616A0A1W2PRN6 198 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 HTR3EA5X5Y0 456 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 A6NLC8 198 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 F5H5K5 113 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 ANGPT2O15123 496 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 CENPAP49450 140 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 SLC18A1P54219 525 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 HIST1H3AP68431 136 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
CHMP3-203ENST00000409225 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
CHMP3-203ENST00000409225 ANKDD1AQ495B1 522 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 ZBTB37Q5TC79 503 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 HIST2H3PS2Q5TEC6 136 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 HIST2H3AQ71DI3 136 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 PGAP1Q75T13 922 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 LY6G5BQ8NDX9 201 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 R3HDM4Q96D70 268 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 CCL13Q99616 98 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 NOP16Q9Y3C1 178 aaKnown RBP13.64□□□□□ -0.23
CHMP3-203ENST00000409225 LHFPL6Q9Y693 200 aa13.64□□□□□ -0.23
CHMP3-203ENST00000409225 K7EIL1 84 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 PTBP3O95758 552 aaKnown RBP13.63□□□□□ -0.23
CHMP3-203ENST00000409225 LCATP04180 440 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 GRPP07492 148 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 ACSM4P0C7M7 580 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 ZNF26P17031 533 aaPredicted RBP13.63□□□□□ -0.23
CHMP3-203ENST00000409225 GPR4P46093 362 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 PRKCDQ05655 676 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 WDR93Q6P2C0 686 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 MRPL21Q7Z2W9 205 aaKnown RBP13.63□□□□□ -0.23
CHMP3-203ENST00000409225 FAM122BQ7Z309 247 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 NAA40Q86UY6 237 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 Q8N7P7 452 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 PRRC1Q96M27 445 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 SLC22A4Q9H015 551 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 RHCGQ9UBD6 479 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 AURKCQ9UQB9 309 aa13.63□□□□□ -0.23
CHMP3-203ENST00000409225 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 CDC42EP2O14613 210 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 GMDSO60547 372 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 FBXO24O75426 580 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 KRT34O76011 436 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 CD28P10747 220 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 IFNA8P32881 189 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 YAP1P46937 504 aaKnown RBP13.62□□□□□ -0.23
CHMP3-203ENST00000409225 EMX1Q04741 257 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-203ENST00000409225 KCNMB1Q16558 191 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 TEX36Q5VZQ5 186 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 FAM216BQ8N7L0 139 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 PLPP7Q8NBV4 271 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 RORBQ92753 470 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 SSX3Q99909 188 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 NUAK2Q9H093 628 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 NMNAT1Q9HAN9 279 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-203ENST00000409225 VSX1Q9NZR4 365 aaPredicted RBP13.62□□□□□ -0.23
CHMP3-203ENST00000409225 MAB21L2Q9Y586 359 aa13.62□□□□□ -0.23
CHMP3-203ENST00000409225 CD300LBA8K4G0 201 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 IGLL1P15814 213 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 IKZF1Q13422 519 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 ZBED5Q49AG3 693 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 LRRC23Q53EV4 343 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-203ENST00000409225 DEFB121Q5J5C9 76 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 WDR38Q5JTN6 314 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 LINC00346Q8IVM7 164 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 FAM156AQ8NDB6 213 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 BEND2Q8NDZ0 799 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 ACOT11Q8WXI4 607 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-203ENST00000409225 TNFRSF14Q92956 283 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 TPD52L3Q96J77 140 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 C7orf26Q96N11 449 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 WWC2-AS2Q96NR7 200 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 TSSK2Q96PF2 358 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 PITX2Q99697 317 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 RABEP2Q9H5N1 569 aa13.61□□□□□ -0.23
CHMP3-203ENST00000409225 RANBP3Q9H6Z4 567 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-203ENST00000409225 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP3-203ENST00000409225 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-203ENST00000409225 GGT3PA6NGU5 568 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 SOCS2O14508 198 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 LHBP01229 141 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 IFNA14P01570 189 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 GGT2P36268 569 aa13.6□□□□□ -0.23
CHMP3-203ENST00000409225 UBE2E1P51965 193 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms