RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 RAB5BP61020 215 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 ADAM5Q6NVV9 412 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 OR6S1Q8NH40 331 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 FOXRED1Q96CU9 486 aaPredicted RBP12.59□□□□□ -0.39
ATG3-202ENST00000402314 CHMP1AQ9HD42 196 aaPredicted RBP12.59□□□□□ -0.39
ATG3-202ENST00000402314 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
ATG3-202ENST00000402314 B9D1Q9UPM9 204 aa12.59□□□□□ -0.39
ATG3-202ENST00000402314 MRPS18BQ9Y676 258 aaKnown RBP12.59□□□□□ -0.39
ATG3-202ENST00000402314 ZNF44P15621 663 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 ZNF14P17017 642 aaPredicted RBP12.58□□□□□ -0.4
ATG3-202ENST00000402314 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.4
ATG3-202ENST00000402314 HSD11B2P80365 405 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
ATG3-202ENST00000402314 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 GPX8Q8TED1 209 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 ZC3H10Q96K80 434 aaKnown RBP12.58□□□□□ -0.4
ATG3-202ENST00000402314 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
ATG3-202ENST00000402314 SMIM3Q9BZL3 60 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 SLC2A4RGQ9NR83 387 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 TMED7-TICAM2A0A0A6YYA0 188 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 COLCA2A8K830 154 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 PMP2P02689 132 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 GP1BBP13224 206 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 ABOP16442 354 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 S100A12P80511 92 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 LIPHQ8WWY8 451 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 PIK3IP1Q96FE7 263 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 ARL5BQ96KC2 179 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 VDAC3Q9Y277 283 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 PCDHGA1Q9Y5H4 931 aa12.58□□□□□ -0.4
ATG3-202ENST00000402314 TRBV5-5A0A0J9YX44 114 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 TSPAN2O60636 221 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 OR6A2O95222 327 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 TXNDC12O95881 172 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 ARG1P05089 322 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 HNRNPKP61978 463 aaKnown RBP eCLIP12.57□□□□□ -0.4
ATG3-202ENST00000402314 MICBQ29980 383 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 LURAP1LQ8IV03 231 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 SPACA5Q96QH8 159 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 LOC100289279A0A1B0GTE1 492 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 LOC101059948A0A1B0GTJ6 334 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 BLACEA4D250 179 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 C1orf196B1AJZ1 125 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 LRP3O75074 770 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 CD8AP01732 235 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 EIF1P41567 113 aaKnown RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 FBXW4P57775 412 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 RNASE10Q5GAN6 216 aaKnown RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 C17orf82Q86X59 251 aaPredicted RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 ZNF584Q8IVC4 421 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 SLC25A45Q8N413 288 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 ZSCAN4Q8NAM6 433 aaPredicted RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 SLC38A9Q8NBW4 561 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 OR51F2Q8NH61 342 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 SECTM1Q8WVN6 248 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 IP6K3Q96PC2 410 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 NRIP2Q9BQI9 281 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
ATG3-202ENST00000402314 COA3Q9Y2R0 106 aaPredicted RBP12.57□□□□□ -0.4
ATG3-202ENST00000402314 TRAV36DV7A0A075B6V5 113 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 H0YIZ8 118 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 M0R036 132 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 ZNF217O75362 1048 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 MED6O75586 246 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 PIAS2O75928 621 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 CD1AP06126 327 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 HOXB1P14653 301 aaPredicted RBP12.56□□□□□ -0.4
ATG3-202ENST00000402314 HRH1P35367 487 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 CD96P40200 585 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 ACTBP60709 375 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 S100A10P60903 97 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 ACTG1P63261 375 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 PAPD4Q6PIY7 484 aaKnown RBP12.56□□□□□ -0.4
ATG3-202ENST00000402314 MARCH1Q8TCQ1 289 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 SLC41A2Q96JW4 573 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 MFRPQ9BY79 579 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 C9orf170A2RU37 121 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 ALG1L2C9J202 215 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 EIF1AYO14602 144 aaKnown RBP12.56□□□□□ -0.4
ATG3-202ENST00000402314 ZNF735P0CB33 412 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 TPT1P13693 172 aaKnown RBP12.56□□□□□ -0.4
ATG3-202ENST00000402314 NXPH1P58417 271 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 CDPF1Q6NVV7 123 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 RNF141Q8WVD5 230 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
ATG3-202ENST00000402314 OR5AC2Q9NZP5 309 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 COPS7AQ9UBW8 275 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 MMACHCQ9Y4U1 282 aa12.56□□□□□ -0.4
ATG3-202ENST00000402314 IGKV1D-43A0A0B4J1Z2 117 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms