RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 COL4A1P02462 1669 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 MEIKINA0A087WXM9 373 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 MDFIC2A0A1B0GVS7 189 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 HYAL3O43820 417 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 HPNP05981 417 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 HOXC4P09017 264 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 RAB4AP20338 218 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 TCEAL7Q9BRU2 100 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 CCDC187A0A096LP49 1063 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ARPC4-TTLL3A0A0A6YYG9 625 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 DFFBO76075 338 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 FAHP16930 419 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 OR8B4Q96RC9 309 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 SRRQ9GZT4 340 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 LRP12Q9Y561 859 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 TRAV1-2A0A0B4J238 106 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 RPS2P15880 293 aaKnown RBP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 WIPI1Q5MNZ9 446 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ZFP82Q8N141 532 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 TUBG2Q9NRH3 451 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 KLK11Q9UBX7 282 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 M0R1B8 84 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 OR8U8P0C7N1 319 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 BAMBIQ13145 260 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 LSRQ86X29 649 aaPredicted RBP16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ZDHHC23Q8IYP9 409 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ARV1Q9H2C2 271 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 ATP23Q9Y6H3 246 aa16.39■□□□□ 0.21
COL18A1-204ENST00000400337 TEX51A0A1B0GUA7 166 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 MBTPS2O43462 519 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 OR2G3Q8NGZ4 309 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 YIPF5Q969M3 257 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 K7EQS6 105 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 MGMTP16455 207 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 GNRHR2Q96P88 292 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 OCEL1Q9H607 264 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 FIGNL2A6NMB9 653 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 RAB5CP51148 216 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
COL18A1-204ENST00000400337 OR2B11Q5JQS5 317 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 DND1Q8IYX4 353 aaKnown RBP16.38■□□□□ 0.21
COL18A1-204ENST00000400337 NANPQ8TBE9 248 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 MARC2Q969Z3 335 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 FAM60AQ9NP50 221 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 PLA2G3Q9NZ20 509 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 MBD1Q9UIS9 605 aaPredicted RBP16.38■□□□□ 0.21
COL18A1-204ENST00000400337 MCM3APO60318 1980 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 FABP6P51161 128 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 CLDN20P56880 219 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 PRAMEF5Q5TYX0 476 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 PRAMEF6Q5VXH4 476 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 KCNRGQ8N5I3 272 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 EXD3Q8N9H8 876 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 ST3GAL6Q9Y274 331 aa16.38■□□□□ 0.21
COL18A1-204ENST00000400337 A0A1W2PPH5 198 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-204ENST00000400337 TIAL1Q01085 375 aaKnown RBP eCLIP16.37■□□□□ 0.212e-6■■■□□ 16
COL18A1-204ENST00000400337 CATSPERDQ86XM0 798 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 WFDC8Q8IUA0 241 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 OR2AE1Q8NHA4 323 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 MARCH1Q8TCQ1 289 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 SFT2D1Q8WV19 159 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF891A8MT65 544 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-204ENST00000400337 OIP5O43482 229 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 OR5H8P0DN80 308 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 FCGR2CP31995 323 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 GPNMBQ14956 572 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 GSX2Q9BZM3 304 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 HIF1ANQ9NWT6 349 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 FMODQ06828 376 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 XAF1Q6GPH4 301 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 RIMS4Q9H426 269 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-204ENST00000400337 NEU3Q9UQ49 428 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 SSUH2Q9Y2M2 353 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 OR4E1P0C645 316 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 THBS3P49746 956 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 ELLP55199 621 aaPredicted RBP16.37■□□□□ 0.21
COL18A1-204ENST00000400337 NXPH1P58417 271 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 OR1C1Q15619 314 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 FOXB1Q99853 325 aa16.37■□□□□ 0.21
COL18A1-204ENST00000400337 ZFP92A6NM28 416 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 CT62P0C5K7 136 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 OR11G2Q8NGC1 345 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SIRT3Q9NTG7 399 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-204ENST00000400337 P4HTMQ9NXG6 502 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 PURGQ9UJV8 347 aaKnown RBP16.36■□□□□ 0.21
COL18A1-204ENST00000400337 IL11RAQ14626 422 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 DHRS13Q6UX07 377 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 C16orf47Q6ZP98 133 aaPredicted RBP16.36■□□□□ 0.21
COL18A1-204ENST00000400337 NIPSNAP3BQ9BS92 247 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 DEFA4P12838 97 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SDHBP21912 280 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 ZNF85Q03923 595 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 SSX9Q7RTT3 188 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 VASH2Q86V25 355 aa16.36■□□□□ 0.21
COL18A1-204ENST00000400337 APOA2P02652 100 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms