RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 JSRP1Q96MG2 331 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 MAP3K3Q99759 626 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 RAB33BQ9H082 229 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SPACA1Q9HBV2 294 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 FAM60AQ9NP50 221 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 COA3Q9Y2R0 106 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 YBX2Q9Y2T7 364 aaKnown RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 LRP12Q9Y561 859 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 TMEM269A0A1B0GVZ9 245 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 A0A1W2PP11 408 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 A0A1W2PPE2 198 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 MPIG6BO95866 241 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 CT45A8P0DMV1 189 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 CT45A9P0DMV2 189 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SLC2A1P11166 492 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 FHITP49789 147 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 CAV2P51636 162 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ACKR1Q16570 336 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 AWAT1Q58HT5 328 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 CT45A2Q5DJT8 189 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 DRAM2Q6UX65 266 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 LURAP1LQ8IV03 231 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ZNF679Q8IYX0 411 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 PAQR4Q8N4S7 273 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 MRPL43Q8N983 215 aaKnown RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 RNF208Q9H0X6 261 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 GDE1Q9NZC3 331 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 GDF2Q9UK05 429 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 HIF3AQ9Y2N7 669 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 TEX13DA0A0J9YY54 714 aaPredicted RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 CLN5O75503 358 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 C1QL1O75973 258 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ZNF205O95201 554 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SMIM10L1P0DMW3 83 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 OR13C7P0DN81 318 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 CXCR1P25024 350 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 FMODQ06828 376 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 MEF2DQ14814 521 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 EEF1A1P5Q5VTE0 462 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 C20orf204Q6ZNR8 217 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 ZNF321PQ8N8H1 164 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SLC30A7Q8NEW0 376 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 OR5D18Q8NGL1 313 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 NT5CQ8TCD5 201 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 GPR119Q8TDV5 335 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 NPRL2Q8WTW4 380 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 EDAQ92838 391 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SLC22A18Q96BI1 424 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 SMIM10Q96HG1 83 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 DGAT2Q96PD7 388 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 OR11A1Q9GZK7 315 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 OR8D2Q9GZM6 311 aa8.82□□□□□ -1
PTCHD4-202ENST00000398738 PNO1Q9NRX1 252 aaKnown RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 LSM5Q9Y4Y9 91 aaKnown RBP8.82□□□□□ -1
PTCHD4-202ENST00000398738 LAMA1P25391 3075 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 C7orf77A4D0Y5 90 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 C5orf52A6NGY3 159 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 EFCAB7A8K855 629 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 RAB27BO00194 218 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 ZNF354AO60765 605 aaPredicted RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 SLC35E2P0CK97 266 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 SMIM6P0DI80 62 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 GLRA1P23415 457 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 SLC25A1P53007 311 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 RPS4XP62701 263 aaKnown RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 EGR3Q06889 387 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 ECH1Q13011 328 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 SKP2Q13309 424 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 ARFRP1Q13795 201 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 WBP2NLQ6ICG8 309 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 EXD3Q8N9H8 876 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 VSTM2LQ96N03 204 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 SEC61A2Q9H9S3 476 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 HHLA2Q9UM44 414 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 FBXO7Q9Y3I1 522 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 URGCP-MRPS24S4R325 110 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 EML5Q05BV3 1969 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 SCDO00767 359 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 DUS4LO95620 317 aaKnown RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 PRH1P02810 166 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 C1orf61Q13536 156 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 AWAT2Q6E213 333 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 CLEC18BQ6UXF7 455 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 ZNF704Q6ZNC4 412 aaPredicted RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 AVL9Q8NBF6 648 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 ST7LQ8TDW4 575 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 RNF128Q8TEB7 428 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 CTHRC1Q96CG8 243 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 LRFN5Q96NI6 719 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 EDEM2Q9BV94 578 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 PAPOLGQ9BWT3 736 aaKnown RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 FOXQ1Q9C009 403 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 OR10A5Q9H207 317 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 MRPL22Q9NWU5 206 aaKnown RBP8.81□□□□□ -1
PTCHD4-202ENST00000398738 SLC17A4Q9Y2C5 497 aa8.81□□□□□ -1
PTCHD4-202ENST00000398738 MMP24Q9Y5R2 645 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms