RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 AP4M1O00189 453 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 CLDN4O14493 209 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 SLC31A2O15432 143 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 EFSO43281 561 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 DUS4LO95620 317 aaKnown RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 IGFBP3P17936 291 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 RCC1P18754 421 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 CXCR1P25024 350 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NDUFA6P56556 154 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 IL34Q6ZMJ4 242 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 CATSPERDQ86XM0 798 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 TGIF2LXQ8IUE1 241 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 SFTPA2Q8IWL1 248 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 YAF2Q8IY57 180 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 AQP3Q92482 292 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ZNF524Q96C55 264 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 RRNAD1Q96FB5 475 aaKnown RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 TMPRSS5Q9H3S3 457 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MRPL22Q9NWU5 206 aaKnown RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 LOC107986453A0A1B0GWG9 222 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 PRSS37A4D1T9 235 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MSGN1A6NI15 193 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 LDLRAD4O15165 306 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NUDT21O43809 227 aaKnown RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MED6O75586 246 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NUDT14O95848 222 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FOLR2P14207 255 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FSTP19883 344 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 RAB5AP20339 215 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 NAAAQ02083 359 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 GAMTQ14353 236 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 SURF2Q15527 256 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ACKR1Q16570 336 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ZNF260Q3ZCT1 412 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ACTBL2Q562R1 376 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 PHF19Q5T6S3 580 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FOXRED2Q8IWF2 684 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ZSCAN4Q8NAM6 433 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MARCH1Q8TCQ1 289 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ST7LQ8TDW4 575 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 ATG101Q9BSB4 218 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 RNF126Q9BV68 326 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 SEC61A2Q9H9S3 476 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 FAM86C1Q9NVL1 165 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 RAB22AQ9UL26 194 aa8.2□□□□□ -1.1
CAPN3-206ENST00000397163 MED19A0JLT2 244 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 A6NCN8 305 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 BTBD17A6NE02 478 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 RAB27BO00194 218 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 LMX1BO60663 402 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 FBXO24O75426 580 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 IFNA2P01563 188 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 CTLA4P16410 223 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 GNB3P16520 340 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 LPAR6P43657 344 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 CYCSP99999 105 aaKnown RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 FAHD2BQ6P2I3 314 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 CHRDL2Q6WN34 429 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 PAQR4Q8N4S7 273 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 FAM160A2Q8N612 972 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 METTL27Q8N6F8 245 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 OR10D4PQ8NGN7 298 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 RAB3CQ96E17 227 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 FAHD2AQ96GK7 314 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 LURAP1Q96LR2 239 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 JSRP1Q96MG2 331 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 LPAR3Q9UBY5 353 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 H0YIZ8 118 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 K7EQS6 105 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 HCRTR2O43614 444 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 UTS2O95399 124 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 GNALP38405 381 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 INSM1Q01101 510 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 ROM1Q03395 351 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 DPPA2Q7Z7J5 298 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 SLC25A43Q8WUT9 341 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-206ENST00000397163 PRODH2Q9UF12 536 aa8.19□□□□□ -1.1
CAPN3-206ENST00000397163 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 WIPF3A6NGB9 483 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ARGFXA6NJG6 315 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 LRP3O75074 770 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 MPZL1O95297 269 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 FAM157CP0CG43 387 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 RAB6AP20340 208 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CX3CR1P49238 355 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TAS2R60P59551 318 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 RPL27P61353 136 aaKnown RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 KIAA0141Q14154 515 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 SLC9A3R2Q15599 337 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 GFI1BQ5VTD9 330 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 FNDC7Q5VTL7 733 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 DBX2Q6ZNG2 339 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms