RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NEDD8Q15843 81 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 KCNMB1Q16558 191 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SGCAQ16586 387 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 TEX30Q5JUR7 227 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SLC18B1Q6NT16 456 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ZNF627Q7L945 461 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SKA3Q8IX90 412 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 KLHL36Q8N4N3 616 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 NANOGP1Q8N7R0 232 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 LINC01356Q8N9X3 169 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 OR2AJ1Q8NGZ0 328 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 THEM6Q8WUY1 208 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SNX33Q8WV41 574 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ASB17Q8WXJ9 295 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 C11orf40Q8WZ69 217 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 YIPF5Q969M3 257 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 MRPL24Q96A35 216 aaKnown RBP8.84□□□□□ -0.99
NEDD8-202ENST00000396828 TBX5Q99593 518 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 SYT3Q9BQG1 590 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ALG8Q9BVK2 526 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 KCNN2Q9H2S1 579 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 NARFLQ9H6Q4 476 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 DYNLRB1Q9NP97 96 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 ACOT13Q9NPJ3 140 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 POLE4Q9NR33 117 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 MRPL22Q9NWU5 206 aaKnown RBP8.84□□□□□ -0.99
NEDD8-202ENST00000396828 POLR1DQ9Y2S0 133 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 CMAHPQ9Y471 501 aa8.84□□□□□ -0.99
NEDD8-202ENST00000396828 A0A1W2PQL4 384 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 FAM157AC9JC47 383 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 NCR1O76036 304 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 MPZL1O95297 269 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 FARS2O95363 451 aaKnown RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 LIMS3P0CW19 117 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 LIMS4P0CW20 117 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 NAT2P11245 290 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 JUNBP17275 347 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 HNF1AP20823 631 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 PCMT1P22061 227 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 CDAP32320 146 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 MAP2K4P45985 399 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 HCCSP53701 268 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 WNT4P56705 351 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 RAB1AP62820 205 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 MRPS34P82930 218 aaKnown RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 EGR3Q06889 387 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 EIF2B1Q14232 305 aaKnown RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 IRF3Q14653 427 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 RAB39AQ14964 217 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 SPHARQ15513 63 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 MED22Q15528 200 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 MEP1BQ16820 701 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 GSG1Q2KHT4 349 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 ALKBH6Q3KRA9 238 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 NRN1LQ496H8 165 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 KCTD18Q6PI47 426 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 LYPD4Q6UWN0 246 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 ZNF813Q6ZN06 617 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 PLEKHG7Q6ZR37 379 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 FOXL2NBQ6ZUU3 175 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 ZNF367Q7RTV3 350 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 DPY19L4Q7Z388 723 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 KCTD20Q7Z5Y7 419 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 LHFPL3Q86UP9 236 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 EGFL6Q8IUX8 553 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 PAQR4Q8N4S7 273 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 OR52N1Q8NH53 320 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 CLDND2Q8NHS1 167 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 OTOSQ8NHW6 89 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 HPS1Q92902 700 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 FOXB1Q99853 325 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 SIAEQ9HAT2 523 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 LPAR2Q9HBW0 351 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 TMEM38BQ9NVV0 291 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 CAB39Q9Y376 341 aaPredicted RBP8.83□□□□□ -1
NEDD8-202ENST00000396828 UGT2A1Q9Y4X1 527 aa8.83□□□□□ -1
NEDD8-202ENST00000396828 TRRAPQ9Y4A5 3859 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 TCF21O43680 179 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 SYNGR3O43761 229 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 VENTXO95231 258 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 PTHP01270 115 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 MT-ND5P03915 603 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 KRT8P05787 483 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 OR8G3PP0DMU2 310 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 CCL2P13500 99 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 GLRXP35754 106 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 SRP14P37108 136 aaKnown RBP8.82□□□□□ -1
NEDD8-202ENST00000396828 PCBD1P61457 104 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 ERVS71-1P61550 626 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 ZNF85Q03923 595 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 AQP6Q13520 282 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 PCK2Q16822 640 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 FAM27BQ5VT28 67 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 UBE2UQ5VVX9 321 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 XAF1Q6GPH4 301 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 ZNF322Q6U7Q0 402 aaPredicted RBP8.82□□□□□ -1
NEDD8-202ENST00000396828 FAM220AQ7Z4H9 259 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 CCDC36Q8IYA8 594 aa8.82□□□□□ -1
NEDD8-202ENST00000396828 SYS1Q8N2H4 156 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms