RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TRBV5-7A0A0A0MS05 114 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 CBR1P16152 277 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 IDH3GP51553 393 aaPredicted RBP17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 DOK3Q7L591 496 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 SLC25A46Q96AG3 418 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 FAM71F1Q96KD3 344 aaPredicted RBP17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 SLITRK2Q9H156 845 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 TCF7L1Q9HCS4 588 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 JKAMPQ9P055 326 aa17.73■□□□□ 0.43
VCPKMT-202ENST00000395860 AGFG2O95081 481 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF14P17017 642 aaPredicted RBP17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 FAM27E3Q08E93 113 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 HNRNPA0Q13151 305 aaKnown RBP17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 TBC1D28Q2M2D7 210 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 FJX1Q86VR8 437 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 S100PBPQ96BU1 408 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 C1QTNF5Q9BXJ0 243 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 SLIRPQ9GZT3 109 aaKnown RBP17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF275Q9NSD4 429 aaPredicted RBP17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 RTTNQ86VV8 2226 aa17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 RP1L1Q8IWN7 2480 aaPredicted RBP17.72■□□□□ 0.43
VCPKMT-202ENST00000395860 IGLV3-1P01715 115 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 CELA3BP08861 270 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 CCL1P22362 96 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 TIMM23BQ5SRD1 257 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 STEAP2Q8NFT2 490 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 SGK3Q96BR1 496 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 LYZL4Q96KX0 146 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 SOX7Q9BT81 388 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 C1QTNF6Q9BXI9 259 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 PMF1-BGLAPU3KQ54 211 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 ANKRD61A6NGH8 418 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 LMX1BO60663 402 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 NCR1O76036 304 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF12P17014 697 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 RAB3BP20337 219 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 CAV3P56539 151 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 ZNF404Q494X3 552 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 OR2AE1Q8NHA4 323 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 MCFD2Q8NI22 146 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 REEP6Q96HR9 211 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 BARHL1Q9BZE3 327 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 USP24Q9UPU5 2620 aa17.71■□□□□ 0.43
VCPKMT-202ENST00000395860 MYO7BQ6PIF6 2116 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 CLPXO76031 633 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 IGKV3-15P01624 115 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 GLYATL3Q5SZD4 288 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 COLCA1Q6ZS62 124 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 MYPOPQ86VE0 399 aaPredicted RBP17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 OR1J2Q8NGS2 313 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 APOBEC3DQ96AK3 386 aaPredicted RBP17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 FGGYQ96C11 551 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 ACTR6Q9GZN1 396 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 COQ3Q9NZJ6 369 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 CKLFQ9UBR5 152 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 SLC25A15Q9Y619 301 aa17.7■□□□□ 0.42
VCPKMT-202ENST00000395860 PDCD5O14737 125 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 XRCC2O43543 280 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 MTRF1O75570 445 aaKnown RBP17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 DHRS3O75911 302 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 PAQR4Q8N4S7 273 aaPredicted RBP17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 PLPP7Q8NBV4 271 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 MUCL1Q96DR8 90 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 DACH2Q96NX9 599 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 RGCCQ9H4X1 137 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 PLEKHA1Q9HB21 404 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 CDH20Q9HBT6 801 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 ZNF391Q9UJN7 358 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 AK6Q9Y3D8 172 aaKnown RBP17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 COL6A6A6NMZ7 2263 aa17.69■□□□□ 0.42
VCPKMT-202ENST00000395860 TRAV8-7A0A075B6U6 113 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 MAS1P04201 325 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 ZNF20P17024 532 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 OR10A3P58181 314 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 SERPINA12Q8IW75 414 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 CCDC54Q8NEL0 328 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 OR14K1Q8NGZ2 314 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 AKAP1Q92667 903 aaKnown RBP eCLIP17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 MOV10Q9HCE1 1003 aaKnown RBP17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 TAS2R4Q9NYW5 299 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 FOXJ3Q9UPW0 622 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 CACNA1BQ00975 2339 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 A6NIN4 97 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 C16orf97H3BN30 126 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 FSTP19883 344 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 CHRNB4P30926 498 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 GNALP38405 381 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 LSAMPQ13449 338 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 PPA1Q15181 289 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 NR2C2APQ86WQ0 139 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 PARP16Q8N5Y8 322 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 PRR7Q8TB68 274 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 ADAT3Q96EY9 351 aaPredicted RBP17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 NXF2Q9GZY0 626 aaKnown RBP17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 MMP27Q9H306 513 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 PLEKHB1Q9UF11 243 aaPredicted RBP17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 V9GYS6 101 aa17.68■□□□□ 0.42
VCPKMT-202ENST00000395860 POLEQ07864 2286 aa17.67■□□□□ 0.42
VCPKMT-202ENST00000395860 A0A1B0GUH1 482 aa17.67■□□□□ 0.42
VCPKMT-202ENST00000395860 PAX7P23759 505 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms