RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NOL4LQ96MY1 436 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 CALHM2Q9HA72 323 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 FBXO34Q9NWN3 711 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SLC17A4Q9Y2C5 497 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 GNB1P62873 340 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 CSNK1G2P78368 415 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TPBGQ13641 420 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TRMT12Q53H54 448 aaKnown RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 JAM3Q9BX67 310 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 SLCO1B1Q9Y6L6 691 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 DSCR3O14972 297 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 GSTP1P09211 210 aaKnown RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 EMDP50402 254 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 EDDM3BP56851 147 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM97Q5BJF2 176 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TP53I13Q8NBR0 393 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 KLHDC9Q8NEP7 349 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 OR51F2Q8NH61 342 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 OR7C2O60412 319 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 DAOP14920 347 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 PXNP49023 591 aaPredicted RBP14.67□□□□□ -0.06
SHANK1-204ENST00000391814 AGBL4Q5VU57 503 aa14.67□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM272A0A1B0GTI8 110 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 CST4P01036 141 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 KCNAB1Q14722 419 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 HSF5Q4G112 596 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ETV3LQ6ZN32 361 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 TCTEX1D1Q8N7M0 179 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 CMTM3Q96MX0 182 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 EMC6Q9BV81 110 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ING1Q9UK53 422 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 OR11H7Q8NGC8 314 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 EXTL1Q92935 676 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 DBX1A6NMT0 343 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 SPINT2O43291 252 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 CST7O76096 145 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 SSBP1Q04837 148 aaKnown RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 SEMA3BQ13214 749 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 OR8B8Q15620 311 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 PCK2Q16822 640 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM65Q6PI78 240 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 LHFPL2Q6ZUX7 228 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 OR52N4Q8NGI2 321 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 PHYHIPLQ96FC7 376 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 G3V3Y1 287 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 BCAT2O15382 392 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ZNF207O43670 478 aaKnown RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ZFAND5O76080 213 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ZNF468Q5VIY5 522 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ALKAL1Q6UXT8 129 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 SYS1Q8N2H4 156 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 NHLRC2Q8NBF2 726 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ERGIC1Q969X5 290 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 R4GMQ9 66 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 COL2A1P02458 1487 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 LBX1P52954 281 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ZNF154Q13106 437 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 ABHD17CQ6PCB6 329 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 HSD17B13Q7Z5P4 300 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 MISPQ8IVT2 679 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 PLPP6Q8IY26 295 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 OR5AS1Q8N127 324 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 EDAQ92838 391 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 PDXPQ96GD0 296 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 C1QTNF6Q9BXI9 259 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 LINC00862A6NCI5 91 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 DHODHQ02127 395 aa14.66□□□□□ -0.06
SHANK1-204ENST00000391814 MRM1Q6IN84 353 aaKnown RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM184BQ9Y519 407 aaPredicted RBP14.66□□□□□ -0.06
SHANK1-204ENST00000391814 C9orf170A2RU37 121 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 GATCO43716 136 aaKnown RBP14.65□□□□□ -0.06
SHANK1-204ENST00000391814 CRYBA1P05813 215 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 GUSBP08236 651 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 DRAM2Q6UX65 266 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 GJC3Q8NFK1 279 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 PBOV1Q9GZY1 135 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 V9GYH0 126 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 C12orf73Q69YU5 71 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 ANKRD16Q6P6B7 361 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 RGP1Q92546 391 aaPredicted RBP14.65□□□□□ -0.06
SHANK1-204ENST00000391814 SLC35E1Q96K37 410 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 TBPP20226 339 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 ENPP1P22413 925 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 NOVP48745 357 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 HNRNPA1L2Q32P51 320 aaKnown RBP14.65□□□□□ -0.06
SHANK1-204ENST00000391814 TMEM128Q5BJH2 165 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 ELFN2Q5R3F8 820 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 PRDM7Q9NQW5 492 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 UQCC1Q9NVA1 299 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 A0A1B0GTL3 188 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 H3BP45 60 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 MT-ATP6P00846 226 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 ZNF865P0CJ78 1059 aaPredicted RBP14.65□□□□□ -0.06
SHANK1-204ENST00000391814 TAS2R45P59539 299 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 MPPED2Q15777 294 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 SDF2Q99470 211 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 HSBP1O75506 76 aa14.65□□□□□ -0.06
SHANK1-204ENST00000391814 ABHD16AO95870 558 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms