RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 MED7O43513 233 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GNRH2O43555 120 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RNF13O43567 381 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DENRO43583 198 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TRAPPC3O43617 180 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CYTH3O43739 400 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SYNGR1O43759 233 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC25A20O43772 301 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DUX1O43812 170 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC37A4O43826 429 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDUFS5O43920 106 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CXCL13O43927 109 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRKYO43930 277 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRPSAP2O60256 369 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MGRN1O60291 552 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NME2P1O60361 137 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FADS1O60427 444 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 OR1I1O60431 355 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DFNA5O60443 496 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KLHL41O60662 606 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PLIN3O60664 434 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC16A7O60669 478 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAD1O60671 282 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 JAK2O60674 1132 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BCE1O60756 84 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC19A2O60779 497 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PRAMEF11O60813 436 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PFKFB2O60825 505 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TIMM17BO60830 172 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DKC1O60832 514 aaKnown RBP eCLIP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SH2D1AO60880 128 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KERAO60938 352 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SCN2BO60939 215 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PDCD6O75340 191 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ALOX12BO75342 701 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BCAS1O75363 584 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PITX3O75364 302 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDUFS6O75380 124 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SEC22BO75396 215 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDUFS3O75489 264 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLN5O75503 358 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 EEDO75530 441 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 STX11O75558 287 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RPS6KA5O75582 802 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MED6O75586 246 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CRTAPO75718 401 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SC5DO75845 299 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PIAS1O75925 651 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 BBOX1O75936 387 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 ATP5LO75964 103 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 OR2J2O76002 312 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SLC22A5O76082 557 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 MYO1DO94832 1006 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 KIAA0754O94854 1291 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 OR2A4O95047 310 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDUFB2O95178 105 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 VAMP5O95183 116 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 VAPBO95292 243 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SNAPINO95295 136 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SMC2O95347 1197 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IPO7O95373 1038 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 APOMO95445 188 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PSMG1O95456 288 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SYNGR4O95473 234 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NSA2O95478 260 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLDN9O95484 217 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TDP2O95551 362 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 DIRAS3O95661 229 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CDS2O95674 445 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 FGFR1OPO95684 399 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 RAB3DO95716 219 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GGPS1O95749 300 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AP2A1O95782 977 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GPR75O95800 540 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TMEM50AO95807 157 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AIFM1O95831 613 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CLIC3O95833 236 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TSPAN12O95859 305 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SNAI1O95863 264 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SYF2O95926 243 aaKnown RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SCGB1D1O95968 90 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TCL1BO95988 128 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PTTG1O95997 202 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NDUFB10O96000 172 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 CYB5R3P00387 301 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PAHP00439 452 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PGK1P00558 417 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 SPINK1P00995 79 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 AGTP01019 485 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 TGFAP01135 160 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 NPPAP01160 153 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 PENKP01210 267 aaPredicted RBP-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 GH1P01241 217 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGF2P01344 180 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IFNA1P01562 189 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IL1BP01584 269 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGLV3-27P01718 113 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV1-46P01743 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV3-33P01772 117 aa-0.1□□□□□ -2.43
TRAJ54-201ENST00000390484 IGHV3-7P01780 117 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms