RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DUSP13Q9UII6 198 aa10.87□□□□□ -0.67
SMN1-202ENST00000380707 EXOSC1Q9Y3B2 195 aaKnown RBP10.87□□□□□ -0.67
SMN1-202ENST00000380707 R4GMQ9 66 aa10.87□□□□□ -0.67
SMN1-202ENST00000380707 TMEM129A0AVI4 362 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 TBX1O43435 398 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 TUBG1P23258 451 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 PRSS12P56730 875 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 ZNF92Q03936 586 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 PSG7Q13046 419 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 GK2Q14410 553 aaPredicted RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 ZNF718Q3SXZ3 478 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 MBNL2Q5VZF2 373 aaKnown RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 FAM220AQ7Z4H9 259 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 OR8B12Q8NGG6 310 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 OR52H1Q8NGJ2 320 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 SYNPRQ8TBG9 265 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 SGK3Q96BR1 496 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 CMBLQ96DG6 245 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 MRPL48Q96GC5 212 aaKnown RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 COG8Q96MW5 612 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 SIGLEC11Q96RL6 698 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 MYCBPQ99417 103 aaPredicted RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 CDCA4Q9BXL8 241 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 PBOV1Q9GZY1 135 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 PLK3Q9H4B4 646 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 TUBG2Q9NRH3 451 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 FAIMQ9NVQ4 179 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 LAMP3Q9UQV4 416 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 CAB39Q9Y376 341 aaPredicted RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
SMN1-202ENST00000380707 NOTCH2Q04721 2471 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 NAV2Q8IVL1 2488 aa10.86□□□□□ -0.67
SMN1-202ENST00000380707 ACOD1A6NK06 481 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 VSTM5A8MXK1 200 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 E9PI62 339 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 LOC110117498-PIK3R3F6TDL0 507 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 RGS10O43665 173 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 ATE1O95260 518 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 HTR1AP08908 422 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 EEF1B2P24534 225 aaKnown RBP10.85□□□□□ -0.67
SMN1-202ENST00000380707 GCH1P30793 250 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 NANOS3P60323 173 aaKnown RBP10.85□□□□□ -0.67
SMN1-202ENST00000380707 MALLQ13021 153 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 GFOD2Q3B7J2 385 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 RNLSQ5VYX0 342 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 FBXW12Q6X9E4 464 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 TMPRSS11AQ6ZMR5 421 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 C20orf204Q6ZNR8 217 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 CATSPERDQ86XM0 798 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 EGFL6Q8IUX8 553 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 FBXL14Q8N1E6 418 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 PRSS35Q8N3Z0 413 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 KLHL36Q8N4N3 616 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 ZNF485Q8NCK3 441 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SPRYD4Q8WW59 207 aaPredicted RBP10.85□□□□□ -0.67
SMN1-202ENST00000380707 GATAD2BQ8WXI9 593 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 OR10A2Q9H208 303 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SP140LQ9H930 580 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
SMN1-202ENST00000380707 OR52A1Q9UKL2 312 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 BLOC1S6Q9UL45 172 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 GTF2A1LQ9UNN4 478 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SLC22A13Q9Y226 551 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 SNX5Q9Y5X3 404 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 TEX15Q9BXT5 2789 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 CACNA1DQ01668 2161 aa10.85□□□□□ -0.67
SMN1-202ENST00000380707 IGLV3-9A0A075B6K5 115 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 B9A039 149 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 IGHV3-13P01766 116 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 MT-ND2P03891 347 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 MT-ND5P03915 603 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 RAC2P15153 192 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 GTF2A1P52655 376 aaPredicted RBP10.84□□□□□ -0.67
SMN1-202ENST00000380707 KLF3P57682 345 aaPredicted RBP10.84□□□□□ -0.67
SMN1-202ENST00000380707 DOC2BQ14184 412 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 IRF3Q14653 427 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 EFNB3Q15768 340 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 TIGD6Q17RP2 521 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 ALKBH6Q3KRA9 238 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 BCL2L15Q5TBC7 163 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 PGAP1Q75T13 922 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 PRSS48Q7RTY5 328 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 DTX2Q86UW9 622 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 NANOGP1Q8N7R0 232 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 OR52N1Q8NH53 320 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 IGFBPL1Q8WX77 278 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 HAVCR1Q96D42 359 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 REEP6Q96HR9 211 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 LYZL4Q96KX0 146 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 SOX7Q9BT81 388 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 TRAF4Q9BUZ4 470 aaPredicted RBP10.84□□□□□ -0.67
SMN1-202ENST00000380707 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
SMN1-202ENST00000380707 YTHDF1Q9BYJ9 559 aaKnown RBP10.84□□□□□ -0.67
SMN1-202ENST00000380707 CCDC90BQ9GZT6 254 aa10.84□□□□□ -0.67
SMN1-202ENST00000380707 CBLN4Q9NTU7 201 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms