RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 GDF2Q9UK05 429 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 COA3Q9Y2R0 106 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 KIR2DS1A0A191URI9 304 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 FAM189A1O60320 539 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 RECKO95980 971 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 PSMB1P20618 241 aaKnown RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 BCL3P20749 454 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 MFAP4P55083 255 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 SNRPGP62308 76 aaKnown RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 MYPOPQ86VE0 399 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 LSRQ86X29 649 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 AQP10Q96PS8 301 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 C11orf68Q9H3H3 251 aaKnown RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 LRP3O75074 770 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 ATP1B1P05026 303 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 LGALS7P47929 136 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 SYPL1Q16563 259 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 OR13C6PQ8NH95 151 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 EAF1Q96JC9 268 aaPredicted RBP12.12□□□□□ -0.47
HIPK3-202ENST00000379016 K7EQS6 105 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 CYC1P08574 325 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 TBXA2RP21731 343 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 C4orf32Q8N8J7 132 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 FZD8Q9H461 694 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 TRAV36DV7A0A075B6V5 113 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 CCDC187A0A096LP49 1063 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 GNG4P50150 75 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 TPBGQ13641 420 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 TIFABQ6ZNK6 161 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF480Q8WV37 535 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 C12orf57Q99622 126 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 NEURL2Q9BR09 285 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 SCN3AQ9NY46 2000 aa12.12□□□□□ -0.47
HIPK3-202ENST00000379016 PI3P19957 117 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF300Q96RE9 604 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 TAS2R4Q9NYW5 299 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 APELAP0DMC3 54 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZBTB25P24278 435 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 THBS4P35443 961 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 GCSAMLQ5JQS6 135 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 LHFPL2Q6ZUX7 228 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 FLYWCH2Q96CP2 140 aaKnown RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 TMPRSS11DO60235 418 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 GABRB3P28472 473 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 COMPP49747 757 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 C6orf15Q6UXA7 325 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 DOLPP1Q86YN1 238 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ST8SIA5O15466 376 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 KLF7O75840 302 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 PMS2P2O95744 297 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ARR3P36575 388 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 RGS7BPQ6MZT1 257 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 BVESQ8NE79 360 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ABHD3Q8WU67 409 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 IGLV3-22A0A075B6J6 115 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 A0A1B0GUH1 482 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 PAFAH1B2P68402 229 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 CCL17Q92583 94 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 DEFB108AA8MXU0 73 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 JTBO76095 146 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 NRASP01111 189 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 IGHV3-7P01780 117 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 RPL29P47914 159 aaKnown RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 RFX2P48378 723 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 SEMA3BQ13214 749 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF343Q6P1L6 599 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 LILRA2Q8N149 483 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 TBX15Q96SF7 602 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
HIPK3-202ENST00000379016 TREM2Q9NZC2 230 aa12.11□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF749O43361 778 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 OR2T7P0C7T2 308 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 POU3F3P20264 500 aaPredicted RBP12.1□□□□□ -0.47
HIPK3-202ENST00000379016 OR3A4PP47883 348 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 MLLT11Q13015 90 aaPredicted RBP12.1□□□□□ -0.47
HIPK3-202ENST00000379016 WDR73Q6P4I2 378 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 SPRED1Q7Z699 444 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 SLC35B2Q8TB61 432 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 ATG101Q9BSB4 218 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 PRDM4Q9UKN5 801 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 NTNG1Q9Y2I2 539 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 DHODHQ02127 395 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 RELAQ04206 551 aa12.1□□□□□ -0.47
HIPK3-202ENST00000379016 FUBP1Q96AE4 644 aaKnown RBP12.1□□□□□ -0.47
HIPK3-202ENST00000379016 A0A0B4J293 547 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms