RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TMEM185AQ8NFB2 350 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 RNF170Q96K19 258 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 FOXB1Q99853 325 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF175Q9Y473 711 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TSC2P49815 1807 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 PTP4A3O75365 173 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TMPRSS7Q7RTY8 843 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 OR1J2Q8NGS2 313 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 PSMF1Q92530 271 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 MCHR2Q969V1 340 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 LOXL4Q96JB6 756 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 C5orf49A4QMS7 147 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 LINC01387J3KSC0 135 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 RGS11O94810 467 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 C1QBP02746 253 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 CHRM2P08172 466 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 ATF1P18846 271 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 PTBP1P26599 531 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TAS2R20P59543 309 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 OPCMLQ14982 345 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 NKX3-1Q99801 234 aaPredicted RBP12.69□□□□□ -0.38
SHROOM1-203ENST00000378679 TMEM235A6NFC5 223 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 C21orf140B9A014 251 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 GABARAPH6UMI1 98 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 NAT2P11245 290 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 ZNF85Q03923 595 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 IKZF1Q13422 519 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 PCK2Q16822 640 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 CCDC190Q86UF4 302 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 C12orf45Q8N5I9 185 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 OR5M9Q8NGP3 310 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 FLVCR1-AS1Q8TAF5 88 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 CHRNA10Q9GZZ6 450 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 ACKR4Q9NPB9 350 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 HS3ST3B1Q9Y662 390 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 RANBP2P49792 3224 aaKnown RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC34A2O95436 690 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 LALBAP00709 142 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 MEOX1P50221 254 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 CDONQ4KMG0 1287 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 SPSB2Q99619 263 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 TMEM82A0PJX8 343 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 TTLL8A6PVC2 850 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 TGFBR3LH3BV60 316 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 TIMM8AO60220 97 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 HLA-AP01891 365 aaKnown RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 GP1BAP07359 652 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 UBBP0CG47 229 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 PET100P0DJ07 73 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 ADH6P28332 368 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 RBP2P50120 134 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 IGLV3-21P80748 117 aaPredicted RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 ELFN2Q5R3F8 820 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 PPP1R35Q8TAP8 253 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 RNF128Q8TEB7 428 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 ADIPOR1Q96A54 375 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 NEUROG3Q9Y4Z2 214 aa12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
SHROOM1-203ENST00000378679 IL2RAP01589 272 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 RAC3P60763 192 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 SLC38A9Q8NBW4 561 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 OR2M3Q8NG83 312 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 DHRS9Q9BPW9 319 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 RNF32Q9H0A6 362 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 CUL9Q8IWT3 2517 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 IGHV3-64DA0A0J9YX35 117 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 IGHA1P01876 353 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 IFI6P09912 130 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 HLA-DOBP13765 273 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 IRF3Q14653 427 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 DCAF10Q5QP82 559 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 RBPMSQ93062 196 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 MCRIP1C9JLW8 97 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 ZIC2O95409 532 aaPredicted RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 GABRB1P18505 474 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 RAB2AP61019 212 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 EXOSC2Q13868 293 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 FAM122CQ6P4D5 195 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 GCNT2Q8N0V5 402 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 OR5AS1Q8N127 324 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 GTPBP8Q8N3Z3 284 aaPredicted RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 SLCO5A1Q9H2Y9 848 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 NPAP1Q9NZP6 1156 aa12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 MRM2Q9UI43 246 aaKnown RBP12.67□□□□□ -0.38
SHROOM1-203ENST00000378679 C17orf51A8MQB3 221 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 F5H5P2 479 aa12.66□□□□□ -0.38
SHROOM1-203ENST00000378679 TO15178 435 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms