RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CCR9P51686 369 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ARHGEF39Q8N4T4 335 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 VN1R2Q8NFZ6 395 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ERGIC1Q969X5 290 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CRYBA1P05813 215 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 BTG1P62324 171 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 KCNAB1Q14722 419 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 AMIGO3Q86WK7 504 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 BCO1Q9HAY6 547 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 A0A0B4J203 849 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CALCBP10092 127 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 POU3F3P20264 500 aaPredicted RBP11.37□□□□□ -0.59
VPS13A-204ENST00000376634 GPM6AP51674 278 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 AGBL4Q5VU57 503 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ACOT7LQ6ZUV0 252 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CXorf36Q9H7Y0 433 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ASH2LQ9UBL3 628 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 VAMP5O95183 116 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 COX5AP20674 150 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 BRCA1P38398 1863 aaKnown RBP11.37□□□□□ -0.59
VPS13A-204ENST00000376634 FCN2Q15485 313 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 SLC48A1Q6P1K1 146 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 BTNL3Q6UXE8 466 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 OR13C5Q8NGS8 318 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 GATA6Q92908 595 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 PHOX2AO14813 284 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ADAM11O75078 769 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
VPS13A-204ENST00000376634 DEFB103AP81534 67 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 RNF212Q495C1 297 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 OR2B11Q5JQS5 317 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 IFI44Q8TCB0 444 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 TMEM230Q96A57 120 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 DDOQ99489 341 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 NDUFB11Q9NX14 153 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 TMEM183BQ1AE95 376 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 OR2T2Q6IF00 324 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 FA2HQ7L5A8 372 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 OR10P1Q8NGE3 313 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 IGKV6-21A0A0C4DH24 114 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 TNFSF11O14788 317 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 SRP9P49458 86 aaKnown RBP11.37□□□□□ -0.59
VPS13A-204ENST00000376634 LRRC10Q5BKY1 277 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 GALMQ96C23 342 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 ARNTP27540 789 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 CYHR1Q6ZMK1 362 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 SPRED1Q7Z699 444 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 MOB3AQ96BX8 217 aa11.37□□□□□ -0.59
VPS13A-204ENST00000376634 A0A0A6YYJ9 748 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 IL2RAP01589 272 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 MED13LQ71F56 2210 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 IVDP26440 423 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 EXOSC2Q13868 293 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 SLCO4C1Q6ZQN7 724 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 GPR119Q8TDV5 335 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 EDARADDQ8WWZ3 215 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ST8SIA4Q92187 359 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 RPL3LQ92901 407 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 LHX4Q969G2 390 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 LRFN3Q9BTN0 628 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 CRLF2Q9HC73 371 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 M0R135 149 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 RAF1P04049 648 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 AREGP15514 252 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF740Q8NDX6 193 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ZNF799Q96GE5 643 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 CCKARP32238 428 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ANKRD16Q6P6B7 361 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 DRAM2Q6UX65 266 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 L3MBTL4Q8NA19 623 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 OR8B4Q96RC9 309 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 COA3Q9Y2R0 106 aaPredicted RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 ANKRD61A6NGH8 418 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 NID1P14543 1247 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 PPIAP62937 165 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 CTNSO60931 367 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 PRKRAO75569 313 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 COTL1Q14019 142 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 SYT14P1Q58G82 188 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 OR13F1Q8NGS4 319 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 CLEC2DQ9UHP7 191 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 TRGV10A0A0A0MS01 117 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 EGR3Q06889 387 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 POM121L2Q96KW2 1035 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 DHCR7Q9UBM7 475 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 A0A096LPE4 126 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 A0A1W2PPZ6 126 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 M0R082 166 aa11.36□□□□□ -0.59
VPS13A-204ENST00000376634 EIF4E2O60573 245 aaKnown RBP11.36□□□□□ -0.59
VPS13A-204ENST00000376634 FCGR2CP31995 323 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms