RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ACOT7LQ6ZUV0 252 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NECAB3Q96P71 396 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 VN1R1Q9GZP7 353 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LAT2Q9GZY6 243 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ALPK3Q96L96 1907 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PRRC2CQ9Y520 2896 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NPIPA2E9PIF3 369 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NPIPA3F8WFD2 350 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 XRCC2O43543 280 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CNR1P21554 472 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GLRA1P23415 457 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PSMB6P28072 239 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CAV2P51636 162 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR1L3Q8NH93 324 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PBOV1Q9GZY1 135 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 KLK13Q9UKR3 277 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 R4GMQ9 66 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 A0A1W2PPC4 97 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 WRBO00258 174 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TXNL1O43396 289 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FLVCR1-AS1Q8TAF5 88 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GABRG3Q99928 467 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 AIFM2Q9BRQ8 373 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 VSIG4Q9Y279 399 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RALGAPA1Q6GYQ0 2036 aa12.86□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IGHV4-34P06331 123 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GUSBP08236 651 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR3A4PP47883 348 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TAF9Q16594 264 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LPAL2Q16609 132 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CLEC1AQ8NC01 280 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MR1Q95460 341 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HS3ST3A1Q9Y663 406 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 QDPRP09417 244 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CPN1P15169 458 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MGMTP16455 207 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FAHP16930 419 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NAGAP17050 411 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SVBPQ8N300 66 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GDF2Q9UK05 429 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 H3BMH7 237 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TO15178 435 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 OR2J2O76002 312 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ASAH2BP0C7U1 165 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF121P58317 390 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RPS4XP62701 263 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 SRYQ05066 204 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FUT7Q11130 342 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GUCA2BQ16661 112 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RGS7BPQ6MZT1 257 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C9orf40Q8IXQ3 194 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TMEM104Q8NE00 496 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF442Q9H7R0 627 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 FBRSQ9HAH7 460 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MEMO1Q9Y316 297 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 KCNMB2Q9Y691 235 aa12.85□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NME2P1O60361 137 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 BCKDHBP21953 392 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LAP3P28838 519 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PAN3Q58A45 887 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 LYG2Q86SG7 212 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TTC9Q92623 222 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 PCOLCE2Q9UKZ9 415 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 TSPAN15O95858 294 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 HOXD4P09016 255 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 ZNF16P17020 682 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 GABREP78334 506 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CLINT1Q14677 625 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RSU1Q15404 277 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MFSD8Q8NHS3 518 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MRPL38Q96DV4 380 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IGKV1D-43A0A0B4J1Z2 117 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 A6NIZ1 184 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 C2CD4DB7Z1M9 353 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 IGHG1P01857 330 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 DBHP09172 617 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 MST1P26927 711 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 CASRP41180 1078 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RAP1BP61224 184 aa12.84□□□□□ -0.35
TNFRSF1B-201ENST00000376259 RAP1AP62834 184 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms