RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TBX1O43435 398 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 PNPP00491 289 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 ADRA2AP08913 450 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 CCDC159P0C7I6 412 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 CDKN1AP38936 164 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 HLXQ14774 488 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 TP53I3Q53FA7 332 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 LIPNQ5VXI9 398 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 LHFPL3Q86UP9 236 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 SYS1Q8N2H4 156 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 OR8B12Q8NGG6 310 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 OR2AE1Q8NHA4 323 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 TMEM80Q96HE8 168 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 PGAM5Q96HS1 289 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 OR10A2Q9H208 303 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 RGCCQ9H4X1 137 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF701Q9NV72 531 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 TAAR3PQ9P1P4 343 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF319Q9P2F9 582 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 CGGBP1Q9UFW8 167 aaPredicted RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 NUFIP1Q9UHK0 495 aaKnown RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 GPR160Q9UJ42 338 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 PURGQ9UJV8 347 aaKnown RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 GNG8Q9UK08 70 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
HSPG2-201ENST00000374673 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
HSPG2-201ENST00000374673 APCP25054 2843 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 CYSRT1A8MQ03 144 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 LOC110117498-PIK3R3F6TDL0 507 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 TACSTD2P09758 323 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 SELEP16581 610 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 LIPAP38571 399 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 MMP15P51511 669 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 OR12D2P58182 307 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF92Q03936 586 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
HSPG2-201ENST00000374673 ST3GAL4Q11206 333 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 TIGD6Q17RP2 521 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 NKPD1Q17RQ9 610 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 AHSA2Q719I0 299 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 PGAP1Q75T13 922 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 MRPL21Q7Z2W9 205 aaKnown RBP12.84□□□□□ -0.35
HSPG2-201ENST00000374673 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF540Q8NDQ6 660 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 REEP6Q96HR9 211 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 REPIN1Q9BWE0 567 aaKnown RBP12.84□□□□□ -0.35
HSPG2-201ENST00000374673 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 PBOV1Q9GZY1 135 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 MS4A5Q9H3V2 200 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 DYNLRB1Q9NP97 96 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 G6PC2Q9NQR9 355 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 ACOXLQ9NUZ1 547 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 AKAP6Q13023 2319 aa12.84□□□□□ -0.35
HSPG2-201ENST00000374673 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 A0A0U1RQV5 110 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 TIMM8AO60220 97 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 RPP14O95059 124 aaKnown RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 MYL12AP19105 171 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 ALDH3B1P43353 468 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 MVKQ03426 396 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 MED21Q13503 144 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 ALKBH6Q3KRA9 238 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 RORBQ92753 470 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 TRMT61AQ96FX7 289 aaKnown RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 CYSLTR2Q9NS75 346 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 OR52A1Q9UKL2 312 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 CAB39Q9Y376 341 aaPredicted RBP12.83□□□□□ -0.36
HSPG2-201ENST00000374673 TPRKBQ9Y3C4 175 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 PCDHGB5Q9Y5G0 923 aa12.83□□□□□ -0.36
HSPG2-201ENST00000374673 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 PLSCR5A0PG75 271 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 J3QLW9 94 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 IGLV3-1P01715 115 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 TTRP02766 147 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 MT-ND5P03915 603 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ZNF19P17023 458 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 CRHBPP24387 322 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 PTH2RP49190 550 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ETV1P50549 477 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 SLC35A2P78381 396 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 FAM3AP98173 230 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 MRPL28Q13084 256 aaKnown RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 ZMAT1Q5H9K5 638 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
HSPG2-201ENST00000374673 BCL2L15Q5TBC7 163 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 OR2T2Q6IF00 324 aa12.82□□□□□ -0.36
HSPG2-201ENST00000374673 FDX2Q6P4F2 183 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms