RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 TIMP3P35625 211 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 PPP5CP53041 499 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 TPTEP56180 551 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 RAB1AP62820 205 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 ZNF45Q02386 682 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 DYNC1I2Q13409 638 aaKnown RBP13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 SF3B4Q15427 424 aaKnown RBP eCLIP13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 ZNF79Q15937 498 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 DOLPP1Q86YN1 238 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 BOD1Q96IK1 185 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 RNF121Q9H920 327 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 RHBDD3Q9Y3P4 386 aa13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 RP1L1Q8IWN7 2480 aaPredicted RBP13.65□□□□□ -0.22
NIPAL3-204ENST00000374399 A0A1B0GVI7 797 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 LYZL6O75951 148 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 APOC1P02654 83 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 CD2P06729 351 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 DDOSTP39656 456 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 PPP3R1P63098 170 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 GABRA6Q16445 453 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 HES5Q5TA89 166 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 FAM166AQ6J272 317 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 COLCA1Q6ZS62 124 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF610Q8N9Z0 462 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 FAM71F1Q96KD3 344 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 NKX3-1Q99801 234 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 SLITRK2Q9H156 845 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 OPN3Q9H1Y3 402 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 V9GYS6 101 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 PRR14LQ5THK1 2151 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 CRHP06850 196 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 TMIGD3P0DMS9 266 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 GLI4P10075 376 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 COX5BP10606 129 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 CD79AP11912 226 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 EDN3P14138 238 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 ELK1P19419 428 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 CD40LGP29965 261 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 EVX1P49640 407 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 CLDN12P56749 244 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 TNK1Q13470 666 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 GFOD2Q3B7J2 385 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 DOK3Q7L591 496 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 LUZP2Q86TE4 346 aa13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 TRMT10AQ8TBZ6 339 aaKnown RBP13.64□□□□□ -0.23
NIPAL3-204ENST00000374399 SHANK1Q9Y566 2161 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 TBX1O43435 398 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 RAD51DO75771 328 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 UBL3O95164 117 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 CCL2P13500 99 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 ARR3P36575 388 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 MZT2AQ6P582 158 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 CNIH2Q6PI25 160 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 GFRALQ6UXV0 394 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 OR2AE1Q8NHA4 323 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 MS4A3Q96HJ5 214 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 POM121L2Q96KW2 1035 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 C1QTNF5Q9BXJ0 243 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 ABRACLQ9P1F3 81 aa13.63□□□□□ -0.23
NIPAL3-204ENST00000374399 MYO7BQ6PIF6 2116 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 LCATP04180 440 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 HOXD4P09016 255 aaPredicted RBP13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 PER3P56645 1201 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 SPANXN2Q5MJ10 180 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 RNF144BQ7Z419 303 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 MDP1Q86V88 176 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 MYPOPQ86VE0 399 aaPredicted RBP13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 SERPINA12Q8IW75 414 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 WDR31Q8NA23 367 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 LGALS14Q8TCE9 139 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 SLC25A28Q96A46 364 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 DIRAS2Q96HU8 199 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 CEP19Q96LK0 163 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 SRRQ9GZT4 340 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 OR10A2Q9H208 303 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 PALMDQ9NP74 551 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 TINAGQ9UJW2 476 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 SPATA2Q9UM82 520 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 PROCRQ9UNN8 238 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 PKD1L2Q7Z442 2459 aa13.62□□□□□ -0.23
NIPAL3-204ENST00000374399 LOC390937A0A1W2PQ73 354 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 A0A1W2PR80 420 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 ANXA2P2A6NMY6 339 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SLC19A2O60779 497 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 DHRS3O75911 302 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 ACKR3P25106 362 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 STOMP27105 288 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 SPOCK1Q08629 439 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 KLRB1Q12918 225 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 PLA2G7Q13093 441 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 MADCAM1Q13477 382 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 GSG1Q2KHT4 349 aa13.61□□□□□ -0.23
NIPAL3-204ENST00000374399 ZNF474Q6S9Z5 364 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms