RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CEACAM16Q2WEN9 425 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 C1orf100Q5SVJ3 147 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 SIAH3Q8IW03 269 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 GRPEL2Q8TAA5 225 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 FCAMRQ8WWV6 532 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 SORCS2Q96PQ0 1159 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 C7orf50Q9BRJ6 194 aaKnown RBP21.96■■□□□ 1.11
CTSA-203ENST00000372459 GPR35Q9HC97 309 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 DIABLOQ9NR28 239 aa21.96■■□□□ 1.11
CTSA-203ENST00000372459 TMEM272A0A1B0GTI8 110 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 CTAG2O75638 210 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 RAB3AP20336 220 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 OTX1P32242 354 aaPredicted RBP21.95■■□□□ 1.1
CTSA-203ENST00000372459 SLC6A9P48067 706 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 TNFSF10P50591 281 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 EFNB2P52799 333 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 MTFR2Q6P444 385 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 SPTSSAQ969W0 71 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 PHF21AQ96BD5 680 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 GON7Q9BXV9 100 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 PRRG4Q9BZD6 226 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 PARPBPQ9NWS1 579 aa21.95■■□□□ 1.1
CTSA-203ENST00000372459 KRT33AO76009 404 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 WT1P19544 449 aaPredicted RBP21.94■■□□□ 1.1
CTSA-203ENST00000372459 CAPZA1P52907 286 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 TNK1Q13470 666 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 DYRK1AQ13627 763 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 RAB35Q15286 201 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 PLA1AQ53H76 456 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 LYPD6Q86Y78 171 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 OR52I2Q8NH67 350 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 NKX3-1Q99801 234 aaPredicted RBP21.94■■□□□ 1.1
CTSA-203ENST00000372459 LDAHQ9H6V9 325 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 SGCEO43556 437 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 B4GALT1P15291 398 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 SCRN3Q0VDG4 424 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 ZNF529Q6P280 563 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 FDCSPQ8NFU4 85 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 AKAP1Q92667 903 aaKnown RBP eCLIP21.94■■□□□ 1.1
CTSA-203ENST00000372459 GCDHQ92947 438 aaPredicted RBP21.94■■□□□ 1.1
CTSA-203ENST00000372459 FAM71F1Q96KD3 344 aaPredicted RBP21.94■■□□□ 1.1
CTSA-203ENST00000372459 SLCO5A1Q9H2Y9 848 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 KCNK15Q9H427 330 aa21.94■■□□□ 1.1
CTSA-203ENST00000372459 M0R135 149 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 ECDO95905 644 aaPredicted RBP21.93■■□□□ 1.1
CTSA-203ENST00000372459 ERCC1P07992 297 aaPredicted RBP21.93■■□□□ 1.1
CTSA-203ENST00000372459 BTCP35070 178 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 KLF9Q13886 244 aaPredicted RBP21.93■■□□□ 1.1
CTSA-203ENST00000372459 GFOD2Q3B7J2 385 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 C6orf183Q5T699 404 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 PGAP1Q75T13 922 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.93■■□□□ 1.1
CTSA-203ENST00000372459 SLC22A24Q8N4F4 322 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 ZNF799Q96GE5 643 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 LINC00470Q9BZP3 86 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 EXO5Q9H790 373 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 LIPGQ9Y5X9 500 aa21.93■■□□□ 1.1
CTSA-203ENST00000372459 A0A0U1RQV5 110 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 GGT3PA6NGU5 568 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 ANOS1P23352 680 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 MAB21L1Q13394 359 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 RSPO1Q2MKA7 263 aaPredicted RBP21.92■■□□□ 1.1
CTSA-203ENST00000372459 Q5BKY6 102 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 CHMP1BQ7LBR1 199 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 ADGRE4PQ86SQ3 457 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 NAA40Q86UY6 237 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 OR13C9Q8NGT0 318 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 FNDC9Q8TBE3 224 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 SOX7Q9BT81 388 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 DEFB127Q9H1M4 99 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 RNF122Q9H9V4 155 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 MCUBQ9NWR8 336 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 DLL3Q9NYJ7 618 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 ABOP16442 354 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 AP3S2P59780 193 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 ECH1Q13011 328 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 TUSC5Q8IXB3 177 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 OR52N4Q8NGI2 321 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 UQCC2Q9BRT2 126 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 DPAGT1Q9H3H5 408 aa21.92■■□□□ 1.1
CTSA-203ENST00000372459 METTL17Q9H7H0 456 aaPredicted RBP21.92■■□□□ 1.1
CTSA-203ENST00000372459 TRGV5A0A0B4J1U4 118 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 ANKRD34BA5PLL1 514 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 ZNF724A8MTY0 619 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 IGLV3-1P01715 115 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 PCBD1P61457 104 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 SNTB2Q13425 540 aaKnown RBP21.91■■□□□ 1.1
CTSA-203ENST00000372459 RTP5Q14D33 572 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 TSPO2Q5TGU0 170 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 ATG5Q9H1Y0 275 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 CNTD2Q9H8S5 307 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 BCO1Q9HAY6 547 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 RHBDD3Q9Y3P4 386 aa21.91■■□□□ 1.1
CTSA-203ENST00000372459 OR6C65A6NJZ3 312 aa21.9■■□□□ 1.1
CTSA-203ENST00000372459 E9PLN8 166 aa21.9■■□□□ 1.1
CTSA-203ENST00000372459 SYNGR3O43761 229 aa21.9■■□□□ 1.1
CTSA-203ENST00000372459 RNPS1Q15287 305 aaKnown RBP21.9■■□□□ 1.1
CTSA-203ENST00000372459 NRN1LQ496H8 165 aa21.9■■□□□ 1.1
CTSA-203ENST00000372459 IGFL2Q6UWQ7 119 aa21.9■■□□□ 1.1
CTSA-203ENST00000372459 PLXDC2Q6UX71 529 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms