RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 RBMS2Q15434 407 aaKnown RBP10.4□□□□□ -0.75
PDE6C-201ENST00000371447 GLDNQ6ZMI3 551 aaPredicted RBP10.4□□□□□ -0.75
PDE6C-201ENST00000371447 PDCD10Q9BUL8 212 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 ST6GALNAC5Q9BVH7 336 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 POTEKPQ9BYX7 375 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 IFT46Q9NQC8 304 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 PLA2G3Q9NZ20 509 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 LOXL2Q9Y4K0 774 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 R4GN57 208 aa10.4□□□□□ -0.75
PDE6C-201ENST00000371447 MED13Q9UHV7 2174 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 HTR3BO95264 441 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 CSF1P09603 554 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ACHEP22303 614 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 PDCD1Q15116 288 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 C5orf46Q6UWT4 87 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ALKAL2Q6UX46 152 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 CDH24Q86UP0 819 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ZNF680Q8NEM1 530 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SFXN2Q96NB2 322 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 C7orf50Q9BRJ6 194 aaKnown RBP10.39□□□□□ -0.75
PDE6C-201ENST00000371447 HES7Q9BYE0 225 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ULBP2Q9BZM5 246 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 METTL21EPA6NDL7 271 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ZNF878C9JN71 531 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 L7N2F9 121 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 M0R233 179 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SULT1B1O43704 296 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SLC22A5O76082 557 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 P04436 131 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 UBCP0CG48 685 aaKnown RBP10.39□□□□□ -0.75
PDE6C-201ENST00000371447 B4GALT1P15291 398 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SERPINA2P20848 420 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 MSX1P28360 303 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 H2BFSP57053 126 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SORDQ00796 357 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 BAMBIQ13145 260 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 ARFRP1Q13795 201 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 TIPARPQ7Z3E1 657 aaKnown RBP10.39□□□□□ -0.75
PDE6C-201ENST00000371447 OR2Y1Q8NGV0 311 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 AKR7LQ8NHP1 331 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 MRPL13Q9BYD1 178 aaKnown RBP10.39□□□□□ -0.75
PDE6C-201ENST00000371447 GLTPQ9NZD2 209 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 KLK13Q9UKR3 277 aa10.39□□□□□ -0.75
PDE6C-201ENST00000371447 NOP16Q9Y3C1 178 aaKnown RBP10.39□□□□□ -0.75
PDE6C-201ENST00000371447 SOCS1O15524 211 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SCO1O75880 301 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 MPC2O95563 127 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 VSIG8P0DPA2 414 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 FGF5P12034 268 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 POU3F2P20265 443 aaPredicted RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SUMO3P55854 103 aaPredicted RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 UNC119Q13432 240 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 C21orf62-AS1Q17RA5 79 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 DCAF12Q5T6F0 453 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 RAB11FIP2Q7L804 512 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SLC25A28Q96A46 364 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SORCS2Q96PQ0 1159 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SRXN1Q9BYN0 137 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SCP2D1Q9UJQ7 156 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 FAM166BA8MTA8 275 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 IFNA6P05013 189 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 GDF1P27539 372 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 PTGS2P35354 604 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 HRH1P35367 487 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SLC35A1P78382 337 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 NKAPLQ5M9Q1 402 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 VASH2Q86V25 355 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ZNF845Q96IR2 970 aaPredicted RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 RADILQ96JH8 1075 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ARL6Q9H0F7 186 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 TMEM265A0A087WTH1 108 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 TMEM82A0PJX8 343 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 NAP1L6A6NFF2 107 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ANGPTL7O43827 346 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ZIC3O60481 467 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 NAGAP17050 411 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 DUSP3P51452 185 aaPredicted RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 MMP16P51512 607 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 MAP2K6P52564 334 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 SNU13P55769 128 aaKnown RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 PER3P56645 1201 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ZXDAP98168 799 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ZP4Q12836 540 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 EXOSC2Q13868 293 aaKnown RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 RNASE10Q5GAN6 216 aaKnown RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 DTX1Q86Y01 620 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 ELMOD2Q8IZ81 293 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 BOLLQ8N9W6 283 aaKnown RBP10.38□□□□□ -0.75
PDE6C-201ENST00000371447 COQ8AQ8NI60 647 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 OIT3Q8WWZ8 545 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 IMMP1LQ96LU5 166 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
PDE6C-201ENST00000371447 A0A1B0GUH1 482 aa10.37□□□□□ -0.75
PDE6C-201ENST00000371447 FAM230AA0A1W2PPH8 454 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms