RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SNRPD2P62316 118 aaKnown RBP11.91□□□□□ -0.5
TPM3-211ENST00000368531 ACTA2P62736 377 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 ACTG2P63267 376 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 PSG7Q13046 419 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 MED21Q13503 144 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 GK2Q14410 553 aaPredicted RBP11.91□□□□□ -0.5
TPM3-211ENST00000368531 NKPD1Q17RQ9 610 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 ODF4Q2M2E3 257 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 MBNL2Q5VZF2 373 aaKnown RBP11.91□□□□□ -0.5
TPM3-211ENST00000368531 OR2T2Q6IF00 324 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 PGAP1Q75T13 922 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 OR52H1Q8NGJ2 320 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 SPRYD4Q8WW59 207 aaPredicted RBP11.91□□□□□ -0.5
TPM3-211ENST00000368531 RORBQ92753 470 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 SIGLEC11Q96RL6 698 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 ZNF649Q9BS31 505 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 CACNG6Q9BXT2 260 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 PBOV1Q9GZY1 135 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 FKBP14Q9NWM8 211 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 PAK1IP1Q9NWT1 392 aaPredicted RBP11.91□□□□□ -0.5
TPM3-211ENST00000368531 OR52A1Q9UKL2 312 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 SLC22A13Q9Y226 551 aa11.91□□□□□ -0.5
TPM3-211ENST00000368531 GGT3PA6NGU5 568 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 H3BSH0 61 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 J3QW42 95 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 XRCC2O43543 280 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 SRSF10O75494 262 aaKnown RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 CDK1P06493 297 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 CCDC159P0C7I6 412 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 NAT2P11245 290 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 CD53P19397 219 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 CRHBPP24387 322 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 DNASE1P24855 282 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 DCTDP32321 178 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 EFNB3Q15768 340 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 SWI5Q1ZZU3 235 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 RBM48Q5RL73 367 aaKnown RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 BCL2L15Q5TBC7 163 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 TMPRSS11AQ6ZMR5 421 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 DTX2Q86UW9 622 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 COMMD2Q86X83 199 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 ZCCHC24Q8N2G6 241 aaKnown RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 KLHL36Q8N4N3 616 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 BHLHE23Q8NDY6 225 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 GTF3AQ92664 365 aaKnown RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 HAVCR1Q96D42 359 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 PELI1Q96FA3 418 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 MYCBPQ99417 103 aaPredicted RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 VRK1Q99986 396 aaPredicted RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 PURGQ9UJV8 347 aaKnown RBP11.9□□□□□ -0.5
TPM3-211ENST00000368531 EDARQ9UNE0 448 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 SNX5Q9Y5X3 404 aa11.9□□□□□ -0.5
TPM3-211ENST00000368531 PLCE1Q9P212 2302 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 ARFGEF3Q5TH69 2177 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 IGLV3-9A0A075B6K5 115 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 E9PI62 339 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 M0R233 179 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 IGHV3-13P01766 116 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 MT-ND5P03915 603 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 HTR1AP08908 422 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 RAC2P15153 192 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 TUBG1P23258 451 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 MMP16P51512 607 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 GBX2P52951 348 aaPredicted RBP11.89□□□□□ -0.51
TPM3-211ENST00000368531 SLC35A2P78381 396 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 C11orf71Q6IPW1 123 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 CDH24Q86UP0 819 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 KLBQ86Z14 1044 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 PIGTQ969N2 578 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 FAM71F1Q96KD3 344 aaPredicted RBP11.89□□□□□ -0.51
TPM3-211ENST00000368531 LYZL4Q96KX0 146 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 SOX7Q9BT81 388 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 TPK1Q9H3S4 243 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 G6PC2Q9NQR9 355 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
TPM3-211ENST00000368531 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 PMF1-BGLAPU3KQ54 211 aa11.89□□□□□ -0.51
TPM3-211ENST00000368531 ACOD1A6NK06 481 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 H3BSA7 217 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 P2RY10O00398 339 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 MYL12BO14950 172 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 SPRY3O43610 288 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 RGS10O43665 173 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 LILRA1O75019 489 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 TTRP02766 147 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 MT-ND2P03891 347 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 BMP4P12644 408 aa11.88□□□□□ -0.51
TPM3-211ENST00000368531 EVX1P49640 407 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms