RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 SLC22A24Q8N4F4 322 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 FAM122AQ96E09 287 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 WDR89Q96FK6 387 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SIGLEC11Q96RL6 698 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 FLVCR1Q9Y5Y0 555 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 H0YIV9 168 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SULT1C2O00338 296 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 NKX2-1P43699 371 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PTTG1IPP53801 180 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 DUX5Q96PT3 197 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PRDM14Q9GZV8 571 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 OR2T7P0C7T2 308 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 RPS19P39019 145 aaKnown RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TMBIM6P55061 237 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ERHP84090 104 aaKnown RBP6.62□□□□□ -1.35
VPS13A-202ENST00000357409 LSAMPQ13449 338 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 MSMO1Q15800 293 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ACER2Q5QJU3 275 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 ADPRHL1Q8NDY3 354 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 SLC35E1Q96K37 410 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PSENENQ9NZ42 101 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 PSG11Q9UQ72 335 aa6.62□□□□□ -1.35
VPS13A-202ENST00000357409 TUBAL3A6NHL2 446 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HOXB6P17509 224 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 IL11P20809 199 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DCAF7P61962 342 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CTU2Q2VPK5 515 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ZMAT1Q5H9K5 638 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 RXFP4Q8TDU9 374 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 LYSMD1Q96S90 227 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DHRS4Q9BTZ2 278 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CBR3O75828 277 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HSD17B1P14061 328 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CD22P20273 847 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TAS2R30P59541 319 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TNXAQ16473 311 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ADAMTSL4Q6UY14 1074 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 MAVSQ7Z434 540 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TRUB1Q8WWH5 349 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DUS3LQ96G46 650 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 UBQLN3Q9H347 655 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TIMM10BQ9Y5J6 103 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CSAG2Q9Y5P2 127 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 NUBP2Q9Y5Y2 271 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 XRN1Q8IZH2 1706 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PLRG1O43660 514 aaKnown RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF32P17041 273 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ZBTB25P24278 435 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DIO1P49895 249 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CCL8P80075 99 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 RAB40BQ12829 278 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 IL10RAQ13651 578 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HIKESHIQ53FT3 197 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 FAM71E1Q6IPT2 247 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 RPEQ96AT9 228 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CNRIP1Q96F85 164 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 LURAP1Q96LR2 239 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TXNIPQ9H3M7 391 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 MMACHCQ9Y4U1 282 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 S4R3C0 116 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 IGHV3-66A0A0C4DH42 116 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 K7EQS6 105 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TPPP2P59282 170 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 KCTD11Q693B1 232 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CNTN4Q8IWV2 1026 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 LGI3Q8N145 548 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 OR10D3Q8NH80 312 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 GPHA2Q96T91 129 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 IL21Q9HBE4 155 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 FUOMA2VDF0 154 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PMS2P1A4D2B8 440 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 GYPAP02724 150 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ARNTP27540 789 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 C21orf58P58505 322 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF774Q6NX45 483 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ETV3LQ6ZN32 361 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 DERL3Q96Q80 235 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 AUNIPQ9H7T9 357 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TAF9BQ9HBM6 251 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HOXC11O43248 304 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PAPLNO95428 1278 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CD1EP15812 388 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 GSG1Q2KHT4 349 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TUSC5Q8IXB3 177 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 PLPP5Q8NEB5 264 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM140Q9NV12 185 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 SAGE1Q9NXZ1 904 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 FLRT3Q9NZU0 649 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ERRFI1Q9UJM3 462 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-202ENST00000357409 LRP3O75074 770 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 CD1BP29016 333 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 B3GNT9Q6UX72 402 aa6.61□□□□□ -1.35
VPS13A-202ENST00000357409 ANKRD33Q7Z3H0 272 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms