RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 C16orf47Q6ZP98 133 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF550Q7Z398 422 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF440Q8IYI8 595 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 LINC00471Q8N535 108 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 FAM26EQ8N5C1 309 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 SLC25A38Q96DW6 304 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 NTNG1Q9Y2I2 539 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF337Q9Y3M9 751 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 CUL9Q8IWT3 2517 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 SCDO00767 359 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 UBL3O95164 117 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 CELA2AP08217 269 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 MMP7P09237 267 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 TMIGD3P0DMS9 266 aaPredicted RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 RAB5AP20339 215 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 TAS2R41P59536 307 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 Q0VFX4 171 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 OR1Q1Q15612 314 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 SPNS3Q6ZMD2 512 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 FCRLAQ7L513 359 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 GDF7Q7Z4P5 450 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 PRR18Q8N4B5 295 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 CD300LFQ8TDQ1 290 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 NTNG2Q96CW9 530 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 SLC41A3Q96GZ6 507 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 DEFB126Q9BYW3 111 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 RTN4RQ9BZR6 473 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 OPA3Q9H6K4 179 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF160Q9HCG1 818 aa9.02□□□□□ -0.97
SYNE1-203ENST00000354674 MRPL22Q9NWU5 206 aaKnown RBP9.02□□□□□ -0.97
SYNE1-203ENST00000354674 ZFHX2Q9C0A1 2572 aaPredicted RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 TRAV14DV4A0A0A6YYC5 116 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 TRAPPC13A5PLN9 417 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 EEF1E1-BLOC1S5C9J1V9 151 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 GFRA3O60609 400 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 OR2A4O95047 310 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 RAB3DO95716 219 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 CSTAP01040 98 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM11P17152 192 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 RAB6AP20340 208 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 NUTF2P61970 127 aaKnown RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 RNF151Q2KHN1 245 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 OLFML2AQ68BL7 652 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 NUP54Q7Z3B4 507 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 MRGPREQ86SM8 312 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 SIRT6Q8N6T7 355 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 OR2A7Q96R45 310 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 RASL10BQ96S79 203 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 PRSS27Q9BQR3 290 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 OR51V1Q9H2C8 321 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 TCF7L1Q9HCS4 588 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 FBXL4Q9UKA2 621 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 A0A0B4J2E0 115 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 A0A1B0GX12 115 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 IGHV2-5P01817 119 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 GYPBP06028 91 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 MGMTP16455 207 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 OTX2P32243 289 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 ATP1B3P54709 279 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 GAS1P54826 345 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 RPS27AP62979 156 aaKnown RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 UBA52P62987 128 aaKnown RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 CD300LDQ6UXZ3 194 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 LINC00114Q6XXX2 140 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 HIST2H3AQ71DI3 136 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM99Q8N816 258 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 ARL11Q969Q4 196 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 FN3KQ9H479 309 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 P4HTMQ9NXG6 502 aa9.01□□□□□ -0.97
SYNE1-203ENST00000354674 CHD3Q12873 2000 aaKnown RBP9.01□□□□□ -0.97
SYNE1-203ENST00000354674 A0A087WUU8 490 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM235A6NFC5 223 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 BLOC1S5-TXNDC5H3BN57 136 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 RBBP9O75884 186 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 OR2J2O76002 312 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 MDKP21741 143 aaPredicted RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 PYCR1P32322 319 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 GUCA2AQ02747 115 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ACSM3Q53FZ2 586 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 AWAT1Q58HT5 328 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 RNLSQ5VYX0 342 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 C12orf73Q69YU5 71 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 JMJD6Q6NYC1 403 aaPredicted RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 C1orf94Q6P1W5 598 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 PGAP1Q75T13 922 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 TPRA1Q86W33 373 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 SKA3Q8IX90 412 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 OR4K5Q8NGD3 323 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 THAP3Q8WTV1 239 aaPredicted RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 SLC25A43Q8WUT9 341 aaPredicted RBP9□□□□□ -0.97
SYNE1-203ENST00000354674 NRIP2Q9BQI9 281 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF426Q9BUY5 554 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 TRIM2Q9C040 744 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 EXO5Q9H790 373 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 RHOFQ9HBH0 211 aa9□□□□□ -0.97
SYNE1-203ENST00000354674 TAS2R5Q9NYW4 299 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms