RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 SPACA1Q9HBV2 294 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 ANAPC10Q9UM13 185 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 GPR132Q9UNW8 380 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 MEMO1Q9Y316 297 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 A0A1B0GW64 132 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 RPL36A-HNRNPH2H7BZ11 118 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 RAB27BO00194 218 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 DCTN6O00399 190 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 TSPAN15O95858 294 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 F10P00742 488 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 SPCS3P61009 180 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 PKIAP61925 76 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 YPEL5P62699 121 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 ZNF74Q16587 644 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 GUK1Q16774 197 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 NUP54Q7Z3B4 507 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 ZNF565Q8N9K5 539 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 TERB2Q8NHR7 220 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 C3orf49Q96BT1 292 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 C2orf88Q9BSF0 95 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 ARV1Q9H2C2 271 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 SMDT1Q9H4I9 107 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 PLA2G2EQ9NZK7 142 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 RHBDD3Q9Y3P4 386 aa13.35□□□□□ -0.27
TRAF3-202ENST00000351691 IGKV1D-42A0A075B6H8 117 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 A0A0A6YYC8 382 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-202ENST00000351691 WIPF3A6NGB9 483 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 I3L1I5 382 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-202ENST00000351691 CD63P08962 238 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 COL9A1P20849 921 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 SLC26A5P58743 744 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 EXOSC7Q15024 291 aaKnown RBP13.34□□□□□ -0.27
TRAF3-202ENST00000351691 TGIF1Q15583 401 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 CATSPERDQ86XM0 798 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 OR9K2Q8NGE7 335 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 MARCH1Q8TCQ1 289 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 BMFQ96LC9 184 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 ZMAT3Q9HA38 289 aaKnown RBP13.34□□□□□ -0.27
TRAF3-202ENST00000351691 FAM212BQ9NTI7 297 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-202ENST00000351691 GRHPRQ9UBQ7 328 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 HDGFL3Q9Y3E1 203 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 PRUNE2Q8WUY3 3088 aa13.34□□□□□ -0.27
TRAF3-202ENST00000351691 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 H0YGG7 62 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 LINC01565O15544 149 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 ZNF264O43296 627 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 LY86O95711 162 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 RD3LP0DJH9 198 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 PNMTP11086 282 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 PAX1P15863 534 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 HNRNPA2B1P22626 353 aaKnown RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 SUCLG1P53597 346 aaKnown RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 ARF3P61204 181 aaPredicted RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 HSD11B2P80365 405 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 VAX1Q5SQQ9 334 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 RNF44Q7L0R7 432 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 FGF14Q92915 247 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 MARS2Q96GW9 593 aaKnown RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 CGGBP1Q9UFW8 167 aaPredicted RBP13.33□□□□□ -0.27
TRAF3-202ENST00000351691 SLC22A13Q9Y226 551 aa13.33□□□□□ -0.27
TRAF3-202ENST00000351691 ELOA3CA0A087WX78 387 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 CYR61O00622 381 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 FGF17O60258 216 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 ASAH2BP0C7U1 165 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 THBS4P35443 961 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 RAB32Q13637 225 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 TOMM34Q15785 309 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 MESTQ5EB52 335 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 CLEC18BQ6UXF7 455 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 RD3Q7Z3Z2 195 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 UBAC2Q8NBM4 344 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 BAHD1Q8TBE0 780 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-202ENST00000351691 AMELYQ99218 206 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 UBQLN4Q9NRR5 601 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 FBLN5Q9UBX5 448 aa13.33□□□□□ -0.28
TRAF3-202ENST00000351691 SCN3AQ9NY46 2000 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 H3BSH0 61 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 OR10H2O60403 315 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 YIF1AO95070 293 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 GPANK1O95872 356 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 IGKV1D-16P01601 117 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 CT62P0C5K7 136 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 ID2Q02363 134 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 ZNHIT3Q15649 155 aaPredicted RBP13.32□□□□□ -0.28
TRAF3-202ENST00000351691 MEP1BQ16820 701 aa13.32□□□□□ -0.28
TRAF3-202ENST00000351691 SLC18B1Q6NT16 456 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms