RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ELOVL3Q9HB03 270 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 MBD1Q9UIS9 605 aaPredicted RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 BRWD3Q6RI45 1802 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 OPN1LWP04000 364 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 OR5AC1P0C628 307 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 FDXRP22570 491 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 PIGAP37287 484 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 EVX1P49640 407 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 METAP1P53582 386 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 CRYBB1P53674 252 aaPredicted RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 MFSD12Q6NUT3 480 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 CYS1Q717R9 158 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 PTRH1Q86Y79 214 aaKnown RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 GPR152Q8TDT2 470 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 ZNF689Q96CS4 500 aaPredicted RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 MS4A3Q96HJ5 214 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 SLC6A18Q96N87 628 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 MOKQ9UQ07 419 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 PIGLQ9Y2B2 252 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 KCNK7Q9Y2U2 307 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 A0A1B0GTW7 788 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 LEFTY2O00292 366 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 ABCD4O14678 606 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 KCNQ2O43526 872 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 DNAL4O96015 105 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 TNFP01375 233 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 HOXB1P14653 301 aaPredicted RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 TNFRSF1BP20333 461 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 S100A4P26447 101 aaKnown RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 SMN1Q16637 294 aaKnown RBP5.65□□□□□ -1.5
VCAN-203ENST00000343200 DEFB128Q7Z7B8 93 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 MKXQ8IYA7 352 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 CHST11Q9NPF2 352 aa5.65□□□□□ -1.5
VCAN-203ENST00000343200 CLEC2LP0C7M8 214 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 CTSAP10619 480 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 PAFAH1B2P68402 229 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NKAIN1Q4KMZ8 207 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NCMAPQ5T1S8 102 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 PODNL1Q6PEZ8 512 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 DOLPP1Q86YN1 238 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 LINC00518Q8N0U6 118 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 OR5AS1Q8N127 324 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 OR13C6PQ8NH95 151 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 WDR34Q96EX3 536 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 GUCD1Q96NT3 240 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 SLC22A12Q96S37 553 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.51
VCAN-203ENST00000343200 SPAG8Q99932 426 aaPredicted RBP5.65□□□□□ -1.51
VCAN-203ENST00000343200 PTPRSQ13332 1948 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 C4orf47A7E2U8 309 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 FZD9O00144 591 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NEURL1O76050 574 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 CLDN7O95471 211 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 GYPBP06028 91 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 ALOX5APP20292 161 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 CDKN2DP55273 166 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 RAB38P57729 211 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 LIPIQ6XZB0 460 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NLGN4XQ8N0W4 816 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 OLIG1Q8TAK6 271 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NUDT11Q96G61 164 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 LINC00052Q96N35 136 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 ZNF558Q96NG5 402 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 AMDHD1Q96NU7 426 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 GPR174Q9BXC1 333 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 LPAR5Q9H1C0 372 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.51
VCAN-203ENST00000343200 GIMAP2Q9UG22 337 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 MEIS2O14770 477 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 SCO2O43819 266 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 GLRA1P23415 457 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 XCR1P46094 333 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 ZNF140P52738 457 aaPredicted RBP5.65□□□□□ -1.51
VCAN-203ENST00000343200 ZNF124Q15973 351 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 ACKR1Q16570 336 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 TMEM164Q5U3C3 297 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 OVCH2Q7RTZ1 564 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 CBLN2Q8IUK8 224 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 DUSP18Q8NEJ0 188 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 ADTRPQ96IZ2 230 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 PMCHL2Q9BQD1 86 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 NEURL2Q9BR09 285 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 MENTQ9BUN1 341 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 DEFB129Q9H1M3 183 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 OR52D1Q9H346 318 aa5.65□□□□□ -1.51
VCAN-203ENST00000343200 SLC25A5P05141 298 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 SLC25A4P12235 298 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 SMAD4Q13485 552 aaKnown RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 CDHR3Q6ZTQ4 885 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
VCAN-203ENST00000343200 OR2A5Q96R48 311 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 GGACTQ9BVM4 153 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 B3GAT1Q9P2W7 334 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 C7orf72A4D263 438 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 CHRM2P08172 466 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 WNT7BP56706 349 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 GABREP78334 506 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 FZD2Q14332 565 aa5.64□□□□□ -1.51
VCAN-203ENST00000343200 MARCH8Q5T0T0 291 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms