RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DOK3Q7L591 496 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 CROCCP3Q8IVE0 287 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 TAS2R4Q9NYW5 299 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 ATPIF1Q9UII2 106 aa12.79□□□□□ -0.36
CBX3-201ENST00000337620 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 A0A0U1RQV5 110 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 INHBBP09529 407 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 EPXP11678 715 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 BMP5P22003 454 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 HOXC12P31275 282 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 NCCRP1Q6ZVX7 275 aaPredicted RBP12.78□□□□□ -0.36
CBX3-201ENST00000337620 LRRTM1Q86UE6 522 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 DNAAF1Q8NEP3 725 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 OR1J2Q8NGS2 313 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 LYZL4Q96KX0 146 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 GFI1Q99684 422 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 SP140LQ9H930 580 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 PKD1L2Q7Z442 2459 aa12.78□□□□□ -0.36
CBX3-201ENST00000337620 A0A0G2JNJ9 132 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ANXA2P2A6NMY6 339 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 COX5BP10606 129 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 BMP4P12644 408 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ZNF20P17024 532 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ADRA2CP18825 462 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 CFL1P23528 166 aaKnown RBP12.77□□□□□ -0.36
CBX3-201ENST00000337620 P2RY6Q15077 328 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ZNF584Q8IVC4 421 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 CCDC36Q8IYA8 594 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 OR2AE1Q8NHA4 323 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 SGK3Q96BR1 496 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 ADAT3Q96EY9 351 aaPredicted RBP12.77□□□□□ -0.36
CBX3-201ENST00000337620 ABCB9Q9NP78 766 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 Q9UFV3 132 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 V9GY05 133 aa12.77□□□□□ -0.36
CBX3-201ENST00000337620 CLDN25C9JDP6 229 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 CCL1P22362 96 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 OPRM1P35372 400 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 APLNRP35414 380 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 MZT2AQ6P582 158 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 ZNF474Q6S9Z5 364 aaPredicted RBP12.77□□□□□ -0.37
CBX3-201ENST00000337620 SERPINA12Q8IW75 414 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 LAX1Q8IWV1 398 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 C1orf162Q8NEQ5 155 aaPredicted RBP12.77□□□□□ -0.37
CBX3-201ENST00000337620 S100ZQ8WXG8 99 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 HMG20AQ9NP66 347 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 AKIP1Q9NQ31 210 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 FOXJ3Q9UPW0 622 aa12.77□□□□□ -0.37
CBX3-201ENST00000337620 ACACBO00763 2458 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 IGLV3-1P01715 115 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 ATF1P18846 271 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 HES5Q5TA89 166 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 DDI2Q5TDH0 399 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 BHLHA15Q7RTS1 189 aaPredicted RBP12.76□□□□□ -0.37
CBX3-201ENST00000337620 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 ACOT12Q8WYK0 555 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 REEP6Q96HR9 211 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 POM121L2Q96KW2 1035 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 ZCCHC4Q9H5U6 513 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 PLEKHA1Q9HB21 404 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 EEF1E1-BLOC1S5C9J1V9 151 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 EEF1E1O43324 174 aaKnown RBP12.76□□□□□ -0.37
CBX3-201ENST00000337620 SERPINA5P05154 406 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
CBX3-201ENST00000337620 ZNF12P17014 697 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 IGFBP3P17936 291 aaPredicted RBP12.76□□□□□ -0.37
CBX3-201ENST00000337620 TNFSF8P32971 234 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 THBS2P35442 1172 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 CASP6P55212 293 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 SPOCK1Q08629 439 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 ZNF846Q147U1 533 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 PCSK4Q6UW60 755 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 ST6GALNAC3Q8NDV1 305 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 OR51A2Q8NGJ7 313 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 OR5D14Q8NGL3 314 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 OR14K1Q8NGZ2 314 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 C1QTNF6Q9BXI9 259 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 C1QTNF5Q9BXJ0 243 aa12.76□□□□□ -0.37
CBX3-201ENST00000337620 A0A0B4J203 849 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 IFITM5A6NNB3 132 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 J3QRK9 145 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 HPGDSO60760 199 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 MTRF1O75570 445 aaKnown RBP12.75□□□□□ -0.37
CBX3-201ENST00000337620 DHRS3O75911 302 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 AGFG2O95081 481 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 PAHP00439 452 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 FSTP19883 344 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 PSMD7P51665 324 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 PPP3R1P63098 170 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 GLYATL3Q5SZD4 288 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 PLPP7Q8NBV4 271 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 SLC30A7Q8NEW0 376 aa12.75□□□□□ -0.37
CBX3-201ENST00000337620 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms